Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N24
(299 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0203 + 21555747-21555805,21555862-21555939,21556034-215560... 53 5e-08
08_01_0008 - 65366-65497,65588-65759,65846-65972,66058-66140,662... 52 6e-08
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 50 4e-07
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 48 1e-06
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 47 2e-06
04_04_0814 + 28266590-28266615,28266780-28266860,28266986-282670... 44 2e-05
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 43 5e-05
01_06_0175 + 27229878-27230056,27231102-27231159,27231230-272312... 37 0.003
10_08_0745 - 20260136-20260236,20260890-20260937,20261025-202611... 28 1.2
03_05_0124 + 21034963-21035181,21035618-21037466,21037485-210381... 28 1.2
02_04_0578 + 24020404-24021178,24021320-24021463,24022096-24022355 28 1.6
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 27 2.1
11_03_0174 - 11235667-11235855,11236557-11236652,11236981-11237145 27 3.6
08_02_0849 - 21841470-21841883,21843748-21843813,21844768-218449... 27 3.6
01_01_0397 + 3034059-3034691 27 3.6
01_07_0053 + 40772966-40773080,40773484-40773578,40773730-407738... 26 4.7
01_06_0203 - 27487469-27489787 26 4.7
12_01_1083 - 11268130-11268290,11268330-11268585,11268946-11269551 26 6.3
08_02_0689 + 20066140-20066505,20067930-20068217 26 6.3
07_03_0857 - 22041551-22041871,22042802-22042948,22043048-22043683 26 6.3
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508... 26 6.3
01_06_1673 + 39059483-39059611,39059851-39060032,39060247-390604... 25 8.3
>09_06_0203 +
21555747-21555805,21555862-21555939,21556034-21556091,
21556191-21556235,21556514-21556549,21556855-21556935,
21557016-21557087,21557184-21557195
Length = 146
Score = 52.8 bits (121), Expect = 5e-08
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 81 KKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSMKD 236
K K +KPKRP SA+ +++ R+ K +HP +K V+ I K GG+ WKSM D
Sbjct: 27 KAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTD 79
>08_01_0008 -
65366-65497,65588-65759,65846-65972,66058-66140,
66232-66329
Length = 203
Score = 52.4 bits (120), Expect = 6e-08
Identities = 23/47 (48%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 102 KPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSMKDK 239
K KRP +A+ L+++ R++ K+EHP K V+ +AK+GGE WKSM D+
Sbjct: 91 KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDE 137
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 49.6 bits (113), Expect = 4e-07
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 81 KKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM 230
KK K + PKR M+ +M + + R +K+ +P L TEIAKK GEMW+ M
Sbjct: 591 KKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKM 640
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +3
Query: 78 RKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSMKDK 239
RKK + KPKRP SA+ ++++ R++ ++ HP K V ++K GE W++M ++
Sbjct: 24 RKKAAASGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQ 78
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 47.2 bits (107), Expect = 2e-06
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 KKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM--KDKSIWXX 254
KK K + PKR ++ +M + + R +K+ +P L TEIAKK GE W+ M ++K +
Sbjct: 550 KKKKDPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMTAEEKQPYVE 609
Query: 255 XXXXXXXQYAKD 290
+YA++
Sbjct: 610 QSQVDKKRYAEE 621
>04_04_0814 +
28266590-28266615,28266780-28266860,28266986-28267043,
28267143-28267187,28268653-28268721,28268821-28268931,
28269038-28269046
Length = 132
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 60 FKIFAIRKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSMKD 236
FK RKK KPKR ++ + +L R Q +HP K V + K GE W++M D
Sbjct: 10 FKAAGKRKKAGGAGKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSD 69
Query: 237 K 239
+
Sbjct: 70 E 70
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 42.7 bits (96), Expect = 5e-05
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 99 DKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM--KDKSIWXXXXXXXX 272
++PK+P S+++L+ AR Q+ E PG+ + + WK + +K W
Sbjct: 412 NRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAEAM 471
Query: 273 XQYAKDLE 296
Y +D+E
Sbjct: 472 AAYKRDME 479
Score = 42.3 bits (95), Expect = 7e-05
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +3
Query: 78 RKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSMKD 236
+KK K KPK+PMSAY ++ R + +E V EI + GE WK+M +
Sbjct: 276 KKKEKDPSKPKQPMSAYFVYTQQRRAALVAEKK--NVPEIGRITGEEWKAMSE 326
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 84 KNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM 230
K K + K+P AY+LW +IK E P E++ G WK++
Sbjct: 150 KGKAGHERKKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKAL 198
>01_06_0175 +
27229878-27230056,27231102-27231159,27231230-27231274,
27232711-27232791,27232884-27232922
Length = 133
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 102 KPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSM 230
+PK+P +A+ ++ R+ K E+P +K + E+ K GE W +M
Sbjct: 48 RPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTM 91
>10_08_0745 -
20260136-20260236,20260890-20260937,20261025-20261165,
20261358-20261603,20261744-20262583,20263253-20263286
Length = 469
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 13 WFSTSTVWLCTSSKIISKFLPSGKKIK*RTSRS--GLCQPI-CCGSTVPENRSSLNIL 177
WF VWLC S ++S+ P K K S GL PI S +P N + + L
Sbjct: 17 WFVLFAVWLCGSQHVLSQKTPLEPKDKFLLSDPPIGLFDPIEISPSVLPHNANPVEPL 74
>03_05_0124 + 21034963-21035181,21035618-21037466,21037485-21038194,
21038426-21038470,21038557-21038745
Length = 1003
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 42 HQFKNNFKIFAIRKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMW 221
HQ ++ K I+K K+T P P +L + + E+I + + +I K+ E
Sbjct: 874 HQLSSSLKKLVIKKCEKLTRLPTIPNLTILLLMGNLSEEIHNS-LDFPMLQILKEWIEWQ 932
Query: 222 KSMKDK 239
+S+ DK
Sbjct: 933 QSLIDK 938
>02_04_0578 + 24020404-24021178,24021320-24021463,24022096-24022355
Length = 392
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 48 FKNNFKIFAIRKKNKMTDK--PKRPMSAYMLWLNSAREQIKSEHPGLK 185
F++ + R N++ K P R + +LWL E + S HPG +
Sbjct: 177 FRSQMQTIISRACNELGVKAVPSRRCVSLLLWLEERYETVYSRHPGFQ 224
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 RKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM--KDKSIWX 251
R+++ +P R SAY + ++K+ HP + E ++ G+ W + DK ++
Sbjct: 220 RQRDPAQPRPNR--SAYNFFFKEKHPELKATHPH-REREYSRMIGDAWNRLAADDKMVYY 276
Query: 252 XXXXXXXXQYAKDLE 296
+Y ++++
Sbjct: 277 RHSAEDKERYKREMQ 291
>11_03_0174 - 11235667-11235855,11236557-11236652,11236981-11237145
Length = 149
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = -2
Query: 193 SVTFSPGCSDLICSLALLSHSI*ADIGRFGLSVILFFFLMAKILK 59
S+T + C +C++A+ ++ +IG+ V ++ + + +LK
Sbjct: 101 SITVNASCHPEVCTIAIHGKNLDVEIGKRQFRVTIYESMSSSVLK 145
>08_02_0849 -
21841470-21841883,21843748-21843813,21844768-21844951,
21845427-21847468,21848544-21848870
Length = 1010
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 42 HQFKNNFKIFAIRKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTE 194
HQ K N IF RKK + +P + LWL S ++ S ++ +
Sbjct: 620 HQ-KENISIFE-RKKTSTSSEPAKETDPMDLWLTSNAQESNSSKDANRIND 668
>01_01_0397 + 3034059-3034691
Length = 210
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 102 KPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKG 209
K R + A ++ + ++R+ IKS G+K + AK+G
Sbjct: 26 KLARTVPAILMRIGTSRKAIKSTMKGMKAMKAAKRG 61
>01_07_0053 +
40772966-40773080,40773484-40773578,40773730-40773843,
40773984-40774088,40774179-40774250,40774293-40774346,
40774507-40774619,40774705-40774839,40774941-40775009,
40775140-40775227,40775327-40775398,40775476-40775576,
40775836-40775953,40776054-40776113,40776206-40776316,
40776499-40776573,40776821-40776854,40777453-40777805,
40778154-40778222,40778526-40778762
Length = 729
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/58 (22%), Positives = 30/58 (51%)
Frame = +3
Query: 66 IFAIRKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSMKDK 239
+F + + +K DKP + SAR+++ +++ + + + +K GE+W D+
Sbjct: 665 VFCVIEMDK-PDKPHNFEPEIYMMERSARDKLIADYNTMDIWDFNEKYGELWDFTVDR 721
>01_06_0203 - 27487469-27489787
Length = 772
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -1
Query: 164 LDLFSGTVEPQH----IG*HRPLRLVRHFIFFPDGKNFEIIFELVHNQTVD 24
+D+ G VE Q IG + LVR + F +GK+ +++E V N+++D
Sbjct: 523 IDVTRGEVEFQAEMSVIGKINHMNLVRIWGFCSEGKHKLLVYEYVENESLD 573
>12_01_1083 - 11268130-11268290,11268330-11268585,11268946-11269551
Length = 340
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 16 FSTSTVWLCTSSKIISKFLPSGK 84
F+T+ W S+ +SKF P GK
Sbjct: 98 FATTNTWDKCSTAFLSKFFPMGK 120
>08_02_0689 + 20066140-20066505,20067930-20068217
Length = 217
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 124 ADIGRFGLSVILFFFLMAKILK 59
AD+G FG + FFL+ K+++
Sbjct: 190 ADVGLFGWHALSVFFLLPKVIR 211
>07_03_0857 - 22041551-22041871,22042802-22042948,22043048-22043683
Length = 367
Score = 25.8 bits (54), Expect = 6.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = -2
Query: 286 LAYCSLAL----AAFSSQILLSFIDFHISPPFLAISVTFSPGCSDLIC 155
LA C+L++ A F S + LSF + HIS + T C +L C
Sbjct: 63 LAECTLSIPVGFAGFKSLVELSFTEMHISEDMIQ---TLIENCPNLEC 107
>03_05_0176 +
21546952-21547887,21548856-21548921,21549959-21550877,
21551277-21551449,21551927-21552475
Length = 880
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 78 RKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPG 179
+KKNK T + KR +A ++ + +Q K H G
Sbjct: 804 KKKNKRTQRRKRKQNAQVMKQHQFEKQRKLYHAG 837
>01_06_1673 +
39059483-39059611,39059851-39060032,39060247-39060445,
39060532-39060693,39060920-39061222,39061343-39061603
Length = 411
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 230 H*FPHFTSFFGYF 192
H FPH T FFG+F
Sbjct: 99 HIFPHRTGFFGWF 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,670,550
Number of Sequences: 37544
Number of extensions: 138697
Number of successful extensions: 424
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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