Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N23
         (389 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   3.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   3.9  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   5.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.2  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    22   6.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   9.1  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    22   9.1  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    22   9.1  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = +3

Query: 177 MDAYNIIKYPLTSEAAMKKIEDNNTLVFIV 266
           +D+YNI++ P+ +E+   ++    TL+ I+
Sbjct: 47  LDSYNILERPVVNESDPLQLSFGLTLMQII 76


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 306 KKLYDINVAKVNTLIRPDG 362
           K+LYD  ++  N LIRP G
Sbjct: 25  KRLYDDLLSNYNRLIRPVG 43


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 103 SEDPKLLSLQGNQSILESHYPNGIAWMPITSS 198
           S DP     Q + S+      N   W+P+ S+
Sbjct: 424 SRDPVRTPFQWDDSVSAGFSTNRTTWLPVASN 455


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 79  VRFALQCISE-DPKLLSLQ--GNQSILESHYPNGIAWMP 186
           V+  LQ I + D KL   +   +Q + +  YPNG  W P
Sbjct: 646 VKPLLQTIQQSDHKLFDFEYDQHQRLSKIIYPNGAEWKP 684


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/50 (22%), Positives = 21/50 (42%)
 Frame = +3

Query: 84  IRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAMKK 233
           +R   +F RP  F P R       S+P    ++ +  + +   S + + K
Sbjct: 416 LRDEKYFHRPTEFIPERWLNDRDASIPSAKEVNPFIFLPFGFGSRSCIGK 465


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 136 NQSILESHYPNGIAWMPITSSNTHSLRKL 222
           N     +H P  I +   TS+NT+ +  L
Sbjct: 475 NSKTKSTHTPKSITYKGATSANTNEMCNL 503


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 306 KKLYDINVAKVNTLIRP 356
           K+LYD  ++  N LIRP
Sbjct: 31  KRLYDDLLSNYNRLIRP 47


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 306 KKLYDINVAKVNTLIRP 356
           K+LYD  ++  N LIRP
Sbjct: 37  KRLYDDLLSNYNRLIRP 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,449
Number of Sequences: 2352
Number of extensions: 7772
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)