Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N23
(389 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 196 6e-51
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 196 6e-51
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 194 5e-50
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 190 6e-49
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 48 3e-06
Y10229-1|CAA71278.1| 784|Drosophila melanogaster RAD54 protein. 31 0.40
AY069599-1|AAL39744.2| 788|Drosophila melanogaster LD35220p pro... 31 0.40
AF069779-1|AAC24577.1| 784|Drosophila melanogaster Rad54 homolo... 31 0.40
AE014134-530|AAF51168.1| 784|Drosophila melanogaster CG3736-PA ... 31 0.40
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 29 2.8
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 29 2.8
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 29 2.8
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 29 2.8
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 29 2.8
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 29 2.8
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 29 2.8
AE014298-2611|AAF48765.3| 1039|Drosophila melanogaster CG8146-PA... 28 5.0
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein. 27 6.6
M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein ( D.me... 27 6.6
BT029984-1|ABM92858.1| 766|Drosophila melanogaster LP16193p pro... 27 6.6
AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA... 27 8.7
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 196 bits (479), Expect = 6e-51
Identities = 88/119 (73%), Positives = 103/119 (86%)
Frame = +3
Query: 27 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYP 206
A K Q+K++KG G R RKIRT+VHFRRP T + PR PKYPRKS+P RNRMDAYNIIKYP
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 207 LTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTLIRPDGEKKAYVK 383
LT+EAAMKKIEDNNTLVF+ H +NK+H++AAV+KLYDI VAKVN LIRPDG+KKAYV+
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVR 252
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 196 bits (479), Expect = 6e-51
Identities = 88/119 (73%), Positives = 103/119 (86%)
Frame = +3
Query: 27 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYP 206
A K Q+K++KG G R RKIRT+VHFRRP T + PR PKYPRKS+P RNRMDAYNIIKYP
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 207 LTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTLIRPDGEKKAYVK 383
LT+EAAMKKIEDNNTLVF+ H +NK+H++AAV+KLYDI VAKVN LIRPDG+KKAYV+
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVR 260
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 194 bits (472), Expect = 5e-50
Identities = 87/119 (73%), Positives = 101/119 (84%)
Frame = +3
Query: 27 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYP 206
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIKYP
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 207 LTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTLIRPDGEKKAYVK 383
LT+EAAMKKIEDNNTLVF+ H +NK H++AAV+KLYDI VAKVN LIRPDG+KKAYV+
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVR 260
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 190 bits (463), Expect = 6e-49
Identities = 87/119 (73%), Positives = 102/119 (85%)
Frame = +3
Query: 27 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYP 206
A K Q+K++K G R RKIRT+VHFRRP T + PR PKYPRKS+P RNRMDAYNIIKYP
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 207 LTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTLIRPDGEKKAYVK 383
LT+EAAMKKIEDNNTLVF+ H +NK+H++AAV+KLYDI VAKVN LIRPDG+KKAYV+
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVR 252
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/98 (31%), Positives = 47/98 (47%)
Frame = +2
Query: 83 DSHFSAFPKTQNF*ASKATKVS*KVTTQTESHGCL*HHQIPTHFGSCHEKD*G*QYPGIH 262
D H A P + A++ ++V ++ E HG + HHQ+PT HE+D G Q+PG+
Sbjct: 143 DPHQRALPSANHPEAAQESQVPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLP 202
Query: 263 CSY*FQQTSHQGCSKETL*H*CC*S*HTYKA*WREEGV 376
+ QQ S + L H + A W EEG+
Sbjct: 203 HTPARQQEPRACRSAQALRHQGGQGERAHPARWPEEGL 240
>Y10229-1|CAA71278.1| 784|Drosophila melanogaster RAD54 protein.
Length = 784
Score = 31.5 bits (68), Expect = 0.40
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = -2
Query: 259 NTRVLLSSIFFMAASEVSGYLMML*ASMRFRLGSDFLGYFGCLGGSKVLGLRKCTEVRIL 80
NT L I F A SE + + A +F++ D Y GG +VLG+R+C R L
Sbjct: 56 NTSELPLPIRFTANSEYELAIAKVLAR-KFKVPMD--NYVPDYGGKRVLGVRRCISRRPL 112
Query: 79 RTLLPCSPLTTF 44
+ C+ L F
Sbjct: 113 HDPMACNALVLF 124
>AY069599-1|AAL39744.2| 788|Drosophila melanogaster LD35220p
protein.
Length = 788
Score = 31.5 bits (68), Expect = 0.40
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = -2
Query: 259 NTRVLLSSIFFMAASEVSGYLMML*ASMRFRLGSDFLGYFGCLGGSKVLGLRKCTEVRIL 80
NT L I F A SE + + A +F++ D Y GG +VLG+R+C R L
Sbjct: 60 NTSELPLPIRFTANSEYELAIAKVLAR-KFKVPMD--NYVPDYGGKRVLGVRRCISRRPL 116
Query: 79 RTLLPCSPLTTF 44
+ C+ L F
Sbjct: 117 HDPMACNALVLF 128
>AF069779-1|AAC24577.1| 784|Drosophila melanogaster Rad54 homolog
OKR protein.
Length = 784
Score = 31.5 bits (68), Expect = 0.40
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = -2
Query: 259 NTRVLLSSIFFMAASEVSGYLMML*ASMRFRLGSDFLGYFGCLGGSKVLGLRKCTEVRIL 80
NT L I F A SE + + A +F++ D Y GG +VLG+R+C R L
Sbjct: 56 NTSELPLPIRFTANSEYELAIAKVLAR-KFKVPMD--NYVPDYGGKRVLGVRRCISRRPL 112
Query: 79 RTLLPCSPLTTF 44
+ C+ L F
Sbjct: 113 HDPMACNALVLF 124
>AE014134-530|AAF51168.1| 784|Drosophila melanogaster CG3736-PA
protein.
Length = 784
Score = 31.5 bits (68), Expect = 0.40
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = -2
Query: 259 NTRVLLSSIFFMAASEVSGYLMML*ASMRFRLGSDFLGYFGCLGGSKVLGLRKCTEVRIL 80
NT L I F A SE + + A +F++ D Y GG +VLG+R+C R L
Sbjct: 56 NTSELPLPIRFTANSEYELAIAKVLAR-KFKVPMD--NYVPDYGGKRVLGVRRCISRRPL 112
Query: 79 RTLLPCSPLTTF 44
+ C+ L F
Sbjct: 113 HDPMACNALVLF 124
>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
protein.
Length = 1638
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 147 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 242
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein.
Length = 1634
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 147 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 242
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein.
Length = 1638
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 147 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 242
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
isoform B protein.
Length = 1638
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 147 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 242
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
isoform A protein.
Length = 1638
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 147 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 242
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
isoform D protein.
Length = 1634
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 147 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 242
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
isoform C protein.
Length = 1634
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 147 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 242
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014298-2611|AAF48765.3| 1039|Drosophila melanogaster CG8146-PA
protein.
Length = 1039
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 204 PLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKL 314
PL+SEAA K + FIV SS+ H+I + KL
Sbjct: 872 PLSSEAAEKVLSSEPDGSFIVRDSSDDHYIFSLSFKL 908
>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
Length = 2483
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 102 FRRPKTFEPPRQPKYPRKS 158
F+RP+T E P+QP P +S
Sbjct: 750 FKRPRTGESPQQPDQPNQS 768
>M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein (
D.melanogaster pecanexgene, exons 1 (partial) and 2. ).
Length = 1938
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 102 FRRPKTFEPPRQPKYPRKS 158
F+RP+T E P+QP P +S
Sbjct: 205 FKRPRTGESPQQPDQPNQS 223
>BT029984-1|ABM92858.1| 766|Drosophila melanogaster LP16193p
protein.
Length = 766
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 129 PRQPKYPRKSLPKRNRMDAYNIIKYPLTSEA 221
PR+ +P +S P+RNRM A ++P +A
Sbjct: 34 PRRMPHPMRSHPRRNRMPANRNHRWPPQRQA 64
>AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA
protein.
Length = 2016
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 111 PKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAMKK 233
PK + Q P+K+ K+ AYN++ L SE +++
Sbjct: 1538 PKKRDENDQSPVPKKTAEKKTEASAYNLVDQILESEKTVEQ 1578
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,950,572
Number of Sequences: 53049
Number of extensions: 347500
Number of successful extensions: 974
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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