Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N23
(389 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal prote... 149 9e-37
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 146 4e-36
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 30 0.50
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 30 0.50
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 30 0.50
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 30 0.50
Z68320-4|CAA92705.4| 448|Caenorhabditis elegans Hypothetical pr... 29 1.2
AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical ... 29 1.2
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 28 2.0
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 27 4.7
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 27 4.7
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 27 4.7
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 27 4.7
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 27 6.2
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 27 6.2
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 27 6.2
Z92806-1|CAB07258.1| 802|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z81583-3|CAB04672.2| 160|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical pr... 26 8.2
U28732-1|AAB04901.2| 540|Caenorhabditis elegans Hypothetical pr... 26 8.2
AF016450-1|AAY86209.1| 82|Caenorhabditis elegans Hypothetical ... 26 8.2
>U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 25.1 protein.
Length = 147
Score = 149 bits (360), Expect = 9e-37
Identities = 70/120 (58%), Positives = 93/120 (77%)
Frame = +3
Query: 24 KALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKY 203
KAL A++KVVKG+ R++RTSVHFRRP T + RQ ++PRKS PK ++MD + II++
Sbjct: 11 KALDAKKKVVKGKRTTHRRQVRTSVHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQH 70
Query: 204 PLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTLIRPDGEKKAYVK 383
PLT+E+AMKKIE++NTLVFIV +NK+ IK AV KLY++ KVNTLI P +KKAYV+
Sbjct: 71 PLTTESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVR 130
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 146 bits (355), Expect = 4e-36
Identities = 69/122 (56%), Positives = 91/122 (74%)
Frame = +3
Query: 18 VTKALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNII 197
V KA++A++ VVKG N + +RTSVHFRRPKT R P+Y RKS P R+++D++ +I
Sbjct: 8 VGKAIQAKKAVVKGSKTNVRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDSFAVI 67
Query: 198 KYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTLIRPDGEKKAY 377
K P T+E++MKKIED+NTLVFIV +NKHHIK AV LY++ KVNTLI P +KKAY
Sbjct: 68 KAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITPLQQKKAY 127
Query: 378 VK 383
V+
Sbjct: 128 VR 129
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 30.3 bits (65), Expect = 0.50
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 48 VVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAM 227
V+ G HG R I+ ++ R P F P P R P+++ +D + Y +T+E M
Sbjct: 437 VLLGAHGVGRRHIKNTLIHRHPNRFAYP-IPHTTRP--PRKDEVDGKHY--YFVTNEQMM 491
Query: 228 KKIEDNNTLVFIVHTSS 278
I++N L + H S
Sbjct: 492 ADIQNNEYLEYGTHEES 508
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical
protein F17E5.1a protein.
Length = 961
Score = 30.3 bits (65), Expect = 0.50
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 48 VVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAM 227
V+ G HG R I+ ++ R P F P P R P+++ +D + Y +T+E M
Sbjct: 778 VLLGAHGVGRRHIKNTLIHRHPNRFAYP-IPHTTRP--PRKDEVDGKHY--YFVTNEQMM 832
Query: 228 KKIEDNNTLVFIVHTSS 278
I++N L + H S
Sbjct: 833 ADIQNNEYLEYGTHEES 849
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 30.3 bits (65), Expect = 0.50
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 48 VVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAM 227
V+ G HG R I+ ++ R P F P P R P+++ +D + Y +T+E M
Sbjct: 437 VLLGAHGVGRRHIKNTLIHRHPNRFAYP-IPHTTRP--PRKDEVDGKHY--YFVTNEQMM 491
Query: 228 KKIEDNNTLVFIVHTSS 278
I++N L + H S
Sbjct: 492 ADIQNNEYLEYGTHEES 508
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 30.3 bits (65), Expect = 0.50
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 48 VVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAM 227
V+ G HG R I+ ++ R P F P P R P+++ +D + Y +T+E M
Sbjct: 778 VLLGAHGVGRRHIKNTLIHRHPNRFAYP-IPHTTRP--PRKDEVDGKHY--YFVTNEQMM 832
Query: 228 KKIEDNNTLVFIVHTSS 278
I++N L + H S
Sbjct: 833 ADIQNNEYLEYGTHEES 849
>Z68320-4|CAA92705.4| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 51 VKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAMK 230
+ G+ N V K +++ PK F+PP Y +LP +RM + K + ++
Sbjct: 254 MNGDELNEVEK--SAISEMHPKLFQPPLLLSYKFNALPLSSRMSCKDFTK----KQFLLR 307
Query: 231 KIEDN 245
+ EDN
Sbjct: 308 QYEDN 312
>AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 51 VKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAMK 230
+ G+ N V K +++ PK F+PP Y +LP +RM + K + ++
Sbjct: 254 MNGDELNEVEK--SAISEMHPKLFQPPLLLSYKFNALPLSSRMSCKDFTK----KQFLLR 307
Query: 231 KIEDN 245
+ EDN
Sbjct: 308 QYEDN 312
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical protein
C01B9.1b protein.
Length = 1671
Score = 28.3 bits (60), Expect = 2.0
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 168 RNRMDAYNIIKYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTL 347
R ++ N +KY + IE NTL+ I+HT + K HI+ + ++ +V + N
Sbjct: 1611 RPLLETANAVKYRKWFFKLIGSIE--NTLILIIHTQNGKIHIQ--ITRIPTSDVPQ-NAT 1665
Query: 348 IRPDGE 365
IR D E
Sbjct: 1666 IRVDFE 1671
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical protein
C01B9.1a protein.
Length = 1601
Score = 28.3 bits (60), Expect = 2.0
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 168 RNRMDAYNIIKYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTL 347
R ++ N +KY + IE NTL+ I+HT + K HI+ + ++ +V + N
Sbjct: 1541 RPLLETANAVKYRKWFFKLIGSIE--NTLILIIHTQNGKIHIQ--ITRIPTSDVPQ-NAT 1595
Query: 348 IRPDGE 365
IR D E
Sbjct: 1596 IRVDFE 1601
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 27.1 bits (57), Expect = 4.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 150 RKSLPKRNRMDAYNIIKYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKL 314
+KSL +NR ++ ++ + S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 27.1 bits (57), Expect = 4.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 150 RKSLPKRNRMDAYNIIKYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKL 314
+KSL +NR ++ ++ + S +++ I NNT ++ T+ K + A+KKL
Sbjct: 79 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 131
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 27.1 bits (57), Expect = 4.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 150 RKSLPKRNRMDAYNIIKYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKL 314
+KSL +NR ++ ++ + S +++ I NNT ++ T+ K + A+KKL
Sbjct: 647 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 699
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 27.1 bits (57), Expect = 4.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 150 RKSLPKRNRMDAYNIIKYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKL 314
+KSL +NR ++ ++ + S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 177 MDAYNIIKYPLTSEAAMKKIEDNNTLV 257
+D YNIIK P++ + KKI + + L+
Sbjct: 1491 VDYYNIIKNPISLQEIKKKISEQSYLL 1517
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 177 MDAYNIIKYPLTSEAAMKKIEDNNTLV 257
+D YNIIK P++ + KKI + + L+
Sbjct: 1491 VDYYNIIKNPISLQEIKKKISEQSYLL 1517
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 TRVKPVTKALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQ-PKYPRKSLPKRNRM 179
+RV+ ++ Q+ + +H N+ +S+H P+ F PP + K R+ L +
Sbjct: 253 SRVRHISITFGEQQHDIDTDHSNQHFGSPSSLHSSLPRAFSPPHKISKARRRQLAVTTSL 312
Query: 180 DAYNIIKYPLTSEAAMKKIEDNNT 251
+ P + +A + ++T
Sbjct: 313 SETSAFPIPSSLKARSRMSSMSST 336
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 TRVKPVTKALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQ-PKYPRKSLPKRNRM 179
+RV+ ++ Q+ + +H N+ +S+H P+ F PP + K R+ L +
Sbjct: 314 SRVRHISITFGEQQHDIDTDHSNQHFGSPSSLHSSLPRAFSPPHKISKARRRQLAVTTSL 373
Query: 180 DAYNIIKYPLTSEAAMKKIEDNNT 251
+ P + +A + ++T
Sbjct: 374 SETSAFPIPSSLKARSRMSSMSST 397
>Z92806-1|CAB07258.1| 802|Caenorhabditis elegans Hypothetical
protein K10G4.1 protein.
Length = 802
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 246 NTLVFIVHTSSNKHHIK 296
NTL+ I+HT + K HI+
Sbjct: 766 NTLILIIHTENGKIHIR 782
>Z81583-3|CAB04672.2| 160|Caenorhabditis elegans Hypothetical
protein T02G6.3 protein.
Length = 160
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 114 KTFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAMKK 233
+TFE +P+ K++PKR ++I P ++A M++
Sbjct: 57 ETFEQSTRPQLKPKAVPKRQGGKGFDITISPDKTQATMEE 96
>Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical
protein C09G9.4 protein.
Length = 611
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 195 IKYPLTSEAAMKKIEDNNTLVF--IVHTSSNKHHIKAAVKKLYDINVAKVNTLIRPD 359
+K P +E + ++D +V I HT ++H K A K L D+ + ++ + D
Sbjct: 155 VKVPEKAEELTEILKDLKEIVIPNICHTHHPRYHAKFAGKSLADLVASTISAALGHD 211
>U28732-1|AAB04901.2| 540|Caenorhabditis elegans Hypothetical
protein F45E1.5 protein.
Length = 540
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 102 FRRPK--TFEPPRQPKYPRKSLPKRNRMDAYNIIKYPLTSEAAMKKIEDNNTLVF--IVH 269
FR+ K T P PK+P +R + + + PL + I+D T++ ++H
Sbjct: 116 FRKEKKETNLEPEPPKHPGADKAERWQKQTWKVFSGPLPPLVSTSGIDDEETVILSKVIH 175
Query: 270 TSSNK 284
++ +
Sbjct: 176 EATQE 180
>AF016450-1|AAY86209.1| 82|Caenorhabditis elegans Hypothetical
protein B0238.15 protein.
Length = 82
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 139 QSILESHYPNGIAWMPITSSNTHSLRKL 222
QSI + H G+AW P+ + L+++
Sbjct: 40 QSISDRHQEQGVAWNPLQGARAQVLQRV 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,728,554
Number of Sequences: 27780
Number of extensions: 178764
Number of successful extensions: 675
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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