BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N21
(336 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L76559-1|AAB67306.1| 2059|Drosophila melanogaster Mus308 protein. 27 4.6
BT021359-1|AAX33507.1| 2059|Drosophila melanogaster LP14642p pro... 27 4.6
AE014297-1578|AAF54858.1| 2059|Drosophila melanogaster CG6019-PA... 27 4.6
AF181626-1|AAD55412.1| 1429|Drosophila melanogaster BcDNA.GH0369... 27 8.0
AE014296-3657|AAF51813.1| 1429|Drosophila melanogaster CG9063-PA... 27 8.0
>L76559-1|AAB67306.1| 2059|Drosophila melanogaster Mus308 protein.
Length = 2059
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 169 RSVYHVSPTPLKIQKKCSIYYYYDL 243
R+ Y PTPLK+Q+ C++ DL
Sbjct: 1509 RAAYQGVPTPLKVQELCNLMARKDL 1533
>BT021359-1|AAX33507.1| 2059|Drosophila melanogaster LP14642p protein.
Length = 2059
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 169 RSVYHVSPTPLKIQKKCSIYYYYDL 243
R+ Y PTPLK+Q+ C++ DL
Sbjct: 1509 RAAYQGVPTPLKVQELCNLMARKDL 1533
>AE014297-1578|AAF54858.1| 2059|Drosophila melanogaster CG6019-PA
protein.
Length = 2059
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 169 RSVYHVSPTPLKIQKKCSIYYYYDL 243
R+ Y PTPLK+Q+ C++ DL
Sbjct: 1509 RAAYQGVPTPLKVQELCNLMARKDL 1533
>AF181626-1|AAD55412.1| 1429|Drosophila melanogaster BcDNA.GH03694
protein.
Length = 1429
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 235 YDLGSNVILMCRVPIKIRQ*E 297
+D G NV L+C+ P+KIR+ E
Sbjct: 354 WDFGLNVDLVCQNPLKIRRLE 374
>AE014296-3657|AAF51813.1| 1429|Drosophila melanogaster CG9063-PA
protein.
Length = 1429
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 235 YDLGSNVILMCRVPIKIRQ*E 297
+D G NV L+C+ P+KIR+ E
Sbjct: 354 WDFGLNVDLVCQNPLKIRRLE 374
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,246,639
Number of Sequences: 53049
Number of extensions: 253230
Number of successful extensions: 336
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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