Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N19
(398 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical... 33 0.100
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 31 0.40
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d... 30 0.53
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase... 30 0.53
Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical pr... 28 2.8
U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of ap... 28 2.8
AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical ... 27 3.7
Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81557-14|CAN99712.1| 321|Caenorhabditis elegans Hypothetical p... 26 8.7
Z81557-13|CAB04530.2| 303|Caenorhabditis elegans Hypothetical p... 26 8.7
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 26 8.7
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 26 8.7
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 26 8.7
>AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical
protein Y111B2A.5a protein.
Length = 434
Score = 32.7 bits (71), Expect = 0.100
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +3
Query: 66 LVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELKPEQILLDKLRPLED 245
++ NTL+ ++ ++A+KT + E + + ++L+ +ELK ++ +K++ LED
Sbjct: 153 MIAQTNTLQMQQESMSTAMKTLQKQILANEREICQLEEKLTESELKTQR-SEEKVKNLED 211
Query: 246 RIL 254
I+
Sbjct: 212 FIV 214
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 30.7 bits (66), Expect = 0.40
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 219 LDKLRPLEDRILPLAADMLLAGVEPVSFYKYLIEKYTSVIIIIC 350
L KL L + +LPL M L E +FY+ L+E + I+I C
Sbjct: 554 LPKLPKLPNMVLPLPTSMPLDS-EICAFYRVLVENKSKYILIAC 596
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 30.7 bits (66), Expect = 0.40
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 219 LDKLRPLEDRILPLAADMLLAGVEPVSFYKYLIEKYTSVIIIIC 350
L KL L + +LPL M L E +FY+ L+E + I+I C
Sbjct: 554 LPKLPKLPNMVLPLPTSMPLDS-EICAFYRVLVENKSKYILIAC 596
>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
protein 1 protein.
Length = 1427
Score = 30.3 bits (65), Expect = 0.53
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +3
Query: 30 VRCSKDIADGNFLVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELKPE 209
V C +AD F+ ++T K+N + ++Y F T K ++ +E P+
Sbjct: 1325 VSCDDPVADSFFVDVWQSTAKSNGQIYEEVFRSYPTDFVETFEEFQKWTSQIPMSEYSPQ 1384
Query: 210 QILLDKLRPLEDRILPLAADMLLAGV 287
Q +++R L+ ++ + L V
Sbjct: 1385 Q-AEERVRDLKGVLVDFPLNFLCKAV 1409
>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
protein.
Length = 1427
Score = 30.3 bits (65), Expect = 0.53
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +3
Query: 30 VRCSKDIADGNFLVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELKPE 209
V C +AD F+ ++T K+N + ++Y F T K ++ +E P+
Sbjct: 1325 VSCDDPVADSFFVDVWQSTAKSNGQIYEEVFRSYPTDFVETFEEFQKWTSQIPMSEYSPQ 1384
Query: 210 QILLDKLRPLEDRILPLAADMLLAGV 287
Q +++R L+ ++ + L V
Sbjct: 1385 Q-AEERVRDLKGVLVDFPLNFLCKAV 1409
>Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical
protein C50B8.2 protein.
Length = 308
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 45 DIADGNFLVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELK 203
DIA+ N + R + T K S +S L T+D + ++F+F + T K
Sbjct: 139 DIANENPITRADATRKLISFRSSSKLLTFDHRLATFQNFIFDKKRNVKCTSKK 191
>U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of
apoptosis homolog protein.
Length = 308
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 45 DIADGNFLVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELK 203
DIA+ N + R + T K S +S L T+D + ++F+F + T K
Sbjct: 139 DIANENPITRADATRKLISFRSSSKLLTFDHRLATFQNFIFDKKRNVKCTSKK 191
>AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical
protein Y46H3D.6 protein.
Length = 345
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 235 GRNLSSNICSGFNSVELSLSRALKRKCSVKLKCLSYVFKALLKVSELVLR 86
G+ LSS+ CSG +E + R L KC + KC+ + +S L ++
Sbjct: 41 GKPLSSSRCSGSCKLENQVLRRLCAKCRYE-KCVQVGMRTSAVLSRLAVK 89
>Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical
protein F25H2.6 protein.
Length = 573
Score = 26.6 bits (56), Expect = 6.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 KDIADGNFLVRNENTLKTNSDTF-NSALKTYDRHFSLTEHFLFKALDRLSSTELK 203
+D +GN +V E KT+ N YD EH L+ +D+L+ +LK
Sbjct: 299 EDKKNGNIVVPEEEKKKTSFRIEGNPVTGHYDDLLVSQEHSLYTTIDKLALEQLK 353
>Z81557-14|CAN99712.1| 321|Caenorhabditis elegans Hypothetical
protein F59A1.11b protein.
Length = 321
Score = 26.2 bits (55), Expect = 8.7
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +3
Query: 102 DTFNSALKTYDRHFSLTEHFLFKALDRLSSTELKPEQILLDKLRPLEDRILPLAADMLLA 281
+TF+++ + + F+L F+ K + S L I L + P+ D ++ A ++L+
Sbjct: 120 ETFSTSSQDFLMLFNLHRLFIIK---KKSLVLLYSIAIPLMLIGPISDAVI--AYPVILS 174
Query: 282 GVEPVSFYKYLIEKYTSVIIIIC 350
G + F+K+ +V+I+IC
Sbjct: 175 GQDMNVFFKHGQVPLITVVIVIC 197
>Z81557-13|CAB04530.2| 303|Caenorhabditis elegans Hypothetical
protein F59A1.11a protein.
Length = 303
Score = 26.2 bits (55), Expect = 8.7
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +3
Query: 102 DTFNSALKTYDRHFSLTEHFLFKALDRLSSTELKPEQILLDKLRPLEDRILPLAADMLLA 281
+TF+++ + + F+L F+ K + S L I L + P+ D ++ A ++L+
Sbjct: 120 ETFSTSSQDFLMLFNLHRLFIIK---KKSLVLLYSIAIPLMLIGPISDAVI--AYPVILS 174
Query: 282 GVEPVSFYKYLIEKYTSVIIIIC 350
G + F+K+ +V+I+IC
Sbjct: 175 GQDMNVFFKHGQVPLITVVIVIC 197
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 139 CLSYVFKALLKVSELVLRVFSLRTKKLPSAMSFEQR 32
C+ K ++ + V R+ LRT++LP+ ++F Q+
Sbjct: 677 CVQGRTKIFIRSPQTVFRLEELRTEQLPNVITFLQK 712
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 139 CLSYVFKALLKVSELVLRVFSLRTKKLPSAMSFEQR 32
C+ K ++ + V R+ LRT++LP+ ++F Q+
Sbjct: 677 CVQGRTKIFIRSPQTVFRLEELRTEQLPNVITFLQK 712
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 215 YLFRFQFSRTKSVQGFEEEMFS*TKMSVICLQSTVESVRVSFESILIAD*E 63
Y+F F + +SV+ + F + I L+S+ +S+RV L+AD E
Sbjct: 224 YVFLL-FEKERSVRDLVLDCFEEEEGLFITLESSTDSIRVQIRPWLLADAE 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,272,895
Number of Sequences: 27780
Number of extensions: 152842
Number of successful extensions: 449
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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