Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N19
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   1.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   3.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   3.9  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   5.2  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   6.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   6.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   6.9  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 238 NGRNLSSNICSGFNSVELSLSRALKRKCSVKLKCL 134
           NG N     CS  +  +L++  A   KC  K K L
Sbjct: 95  NGVNKLITECSAISDADLAVKSAKLLKCIGKYKTL 129


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 13  HRLKDLYAVQKTSPMV 60
           H +KD+Y   K  PMV
Sbjct: 58  HFVKDIYEKYKNEPMV 73


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +3

Query: 48  IADGNFLVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELKPEQILLDK 227
           + DG  +  +E    TN D +NS L     H S   +  +  + R  + E+   Q L+  
Sbjct: 646 LKDGRAMGPSERVHVTNMDQYNSILMI--EHLSPDHNGNYSCVARNLAAEVSHTQRLVVH 703

Query: 228 LRP 236
           + P
Sbjct: 704 VPP 706


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -2

Query: 139 CLSYVFKALLKVSELVLRVFSLRTKKLPSAMSFEQRTSLSA 17
           C  +VF ALL+ + +    +  R KK       + +  +S+
Sbjct: 311 CFVFVFAALLEYAAVNYTYWGARAKKKSKKKESDDKKVISS 351


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 188 TKSVQGFEEE 159
           TK VQGFEE+
Sbjct: 44  TKLVQGFEEQ 53


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 154 SVKLKCLSYVF 122
           S+ LKCL Y+F
Sbjct: 393 SIGLKCLEYLF 403


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 154 SVKLKCLSYVF 122
           S+ LKCL Y+F
Sbjct: 393 SIGLKCLEYLF 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,634
Number of Sequences: 438
Number of extensions: 2153
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)