Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N18
(293 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 33 0.002
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 30 0.021
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 28 0.063
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 27 0.11
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 27 0.15
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 27 0.19
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 26 0.25
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 25 0.45
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 25 0.45
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 25 0.45
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 25 0.45
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 25 0.59
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 25 0.59
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 24 1.0
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 24 1.4
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 24 1.4
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 1.8
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 23 2.4
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 23 3.1
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 22 4.1
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 21 9.6
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 33.5 bits (73), Expect = 0.002
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKEE 292
CY+C GH AREC + +RQ+ C G LA+DC E
Sbjct: 364 CYRCLERGHIARECR--------SPVDRQK-ACIRCGAEGHLAKDCNAE 403
Score = 24.2 bits (50), Expect = 1.0
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 224 NRQREKCFEWNRTGQLARDCK 286
N Q+++C+ G +AR+C+
Sbjct: 358 NLQQQRCYRCLERGHIARECR 378
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 29.9 bits (64), Expect = 0.021
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 146 CYKCNRTGHFAREC 187
C+KC TGHF+R+C
Sbjct: 418 CFKCWETGHFSRDC 431
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 233 REKCFEWNRTGQLARDCK 286
+ +CF+ TG +RDCK
Sbjct: 415 KRRCFKCWETGHFSRDCK 432
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 28.3 bits (60), Expect = 0.063
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKEE 292
CY+C GH AR+C + +RQ + C G A+ C E
Sbjct: 390 CYRCLERGHLARDC--------QSPVDRQ-QACIRCGADGHYAKSCTSE 429
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 233 REKCFEWNRTGQLARDCK 286
R++C+ G LARDC+
Sbjct: 387 RQRCYRCLERGHLARDCQ 404
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 27.5 bits (58), Expect = 0.11
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 143 VCYKCNRTGHFAREC 187
+C+ C R GH AREC
Sbjct: 376 LCFNCLRKGHSAREC 390
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 227 RQREKCFEWNRTGQLARDCK 286
R+ CF R G AR+C+
Sbjct: 372 RKHGLCFNCLRKGHSARECR 391
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 27.1 bits (57), Expect = 0.15
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 137 SSVCYKCNRTGHFARECTQGGVGARDAGFNRQ 232
S++C+KC +GH + CT V D G Q
Sbjct: 296 SNLCWKCGLSGHKKQACT-NSVKCLDCGTRSQ 326
Score = 25.0 bits (52), Expect = 0.59
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQ 193
M CYKC + GH + C +
Sbjct: 272 MEEQKCYKCWKVGHTSYHCRE 292
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 26.6 bits (56), Expect = 0.19
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 137 SSVCYKCNRTGHFAREC 187
S +C KC + GH REC
Sbjct: 349 SKLCIKCGQEGHKIREC 365
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 146 CYKCNRTGHFARECT 190
C+KC + GH ECT
Sbjct: 330 CFKCWKLGHKGFECT 344
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -1
Query: 179 GRSAPSCCTCSIRLNSFSIRCITC 108
G+ C CS+R + ++C C
Sbjct: 310 GKLKVGWCVCSLREATVQVKCFKC 333
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 26.2 bits (55), Expect = 0.25
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDC 283
CY+C GH A C + +RQ + C G ARDC
Sbjct: 477 CYRCLERGHLAHACR--------SSTDRQ-QLCIRCGSEGHKARDC 513
Score = 24.2 bits (50), Expect = 1.0
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 143 VCYKCNRTGHFARECT 190
+C +C GH AR+C+
Sbjct: 499 LCIRCGSEGHKARDCS 514
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 25.4 bits (53), Expect = 0.45
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKEE 292
C++C GH A C +RQ C TG AR C+ E
Sbjct: 508 CFRCLEMGHIASNCRSTA--------DRQ-NLCIRCGLTGHKARSCQNE 547
Score = 25.4 bits (53), Expect = 0.45
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 140 SVCYKCNRTGHFAREC 187
++C +C TGH AR C
Sbjct: 529 NLCIRCGLTGHKARSC 544
Score = 21.4 bits (43), Expect = 7.2
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +2
Query: 230 QREKCFEWNRTGQLARDCK 286
+R++CF G +A +C+
Sbjct: 504 ERQRCFRCLEMGHIASNCR 522
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 25.4 bits (53), Expect = 0.45
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 146 CYKCNRTGHFAREC 187
CY+C GH AR+C
Sbjct: 551 CYRCLEHGHNARDC 564
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 140 SVCYKCNRTGHFARECTQ 193
+VC +C + GH A C +
Sbjct: 572 NVCIRCGQEGHKAGTCME 589
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 25.4 bits (53), Expect = 0.45
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 146 CYKCNRTGHFAREC 187
CY+C GH +R+C
Sbjct: 406 CYRCLERGHVSRDC 419
Score = 25.4 bits (53), Expect = 0.45
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 137 SSVCYKCNRTGHFAREC 187
S+VC +C +GH A C
Sbjct: 426 SNVCIRCGTSGHLAATC 442
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 25.4 bits (53), Expect = 0.45
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 146 CYKCNRTGHFAREC 187
CY+C GH+A +C
Sbjct: 662 CYRCLELGHWAHDC 675
Score = 24.2 bits (50), Expect = 1.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 140 SVCYKCNRTGHFARECT 190
++C +C GH A+ CT
Sbjct: 683 NMCIRCGVVGHMAKVCT 699
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +2
Query: 227 RQREKCFEWNRTGQLARDCK 286
R+R +C+ G A DC+
Sbjct: 657 RERVRCYRCLELGHWAHDCR 676
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 25.0 bits (52), Expect = 0.59
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 146 CYKCNRTGHFAREC 187
C++C + GH R+C
Sbjct: 204 CHRCRKPGHMKRDC 217
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 25.0 bits (52), Expect = 0.59
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 146 CYKCNRTGHFAREC 187
C++C GH REC
Sbjct: 236 CFRCLERGHMVREC 249
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 137 SSVCYKCNRTGHFARECT 190
SS+C +C H A CT
Sbjct: 255 SSLCIRCGAANHKAVNCT 272
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 179 GRSAPSCCTCSIRLNSFSIRCITC 108
GR C TC+ R N F C+ C
Sbjct: 668 GRYCEKCPTCAGRCNEFK-HCVQC 690
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 23.8 bits (49), Expect = 1.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 146 CYKCNRTGHFARECT 190
C++C GH A CT
Sbjct: 466 CFRCLERGHIAATCT 480
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 23.8 bits (49), Expect = 1.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 146 CYKCNRTGHFAREC 187
CY+C +T H +++C
Sbjct: 431 CYRCWQTDHISQDC 444
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECTQ 193
S+ C+ C + GH R+C +
Sbjct: 69 SESKPGACFFCGQPGHKKRDCKE 91
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 242 CFEWNRTGQLARDCKE 289
CF + G RDCKE
Sbjct: 76 CFFCGQPGHKKRDCKE 91
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 146 CYKCNRTGHFAREC 187
CY+C GH A C
Sbjct: 214 CYRCYEYGHTAARC 227
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 216 ASRAPTPPCVHSRA 175
A R +PPC+H RA
Sbjct: 248 AIRVESPPCLHYRA 261
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 137 SSVCYKCNRTGHFARECT 190
SS+C C H A CT
Sbjct: 310 SSLCLHCGAADHRAASCT 327
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +2
Query: 128 KMSSSVCYKCNRTGHFAREC 187
+ S+ C++C GH +C
Sbjct: 285 QQSAVRCFRCLERGHTTADC 304
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 275 APTARCGSTRSTSPAAG 225
A TA G+T STS ++G
Sbjct: 687 AGTASAGTTNSTSSSSG 703
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,733
Number of Sequences: 2352
Number of extensions: 4870
Number of successful extensions: 46
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18253998
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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