Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N18
(293 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 55 4e-08
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 48 7e-06
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 48 7e-06
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 48 7e-06
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 48 7e-06
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 44 1e-04
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 44 1e-04
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 44 1e-04
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 44 1e-04
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 44 1e-04
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 44 1e-04
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 42 5e-04
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 35 0.041
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 33 0.17
AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens ... 33 0.17
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 33 0.17
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 33 0.22
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 33 0.22
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 33 0.22
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 33 0.22
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 33 0.22
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 31 0.67
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 31 0.67
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 31 0.89
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 31 0.89
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 31 0.89
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 31 0.89
AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens ... 30 1.2
AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein. 30 1.2
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 29 2.0
BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein. 29 2.0
BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein. 29 2.0
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 29 2.0
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 29 2.0
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 29 2.0
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 29 2.0
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 29 2.0
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 29 3.6
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 29 3.6
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 29 3.6
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 29 3.6
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 29 3.6
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 29 3.6
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 29 3.6
M69241-1|AAA36048.1| 328|Homo sapiens insulin-like growth facto... 28 4.7
X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec... 27 8.2
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein... 27 8.2
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re... 27 8.2
AB209498-1|BAD92735.1| 2359|Homo sapiens low density lipoprotein... 27 8.2
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQREKCFEWNRTGQLARDC 283
MSS+ C+KC R+GH+AREC GG R GF R+ C+ +G LA+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDC 57
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
+ CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 59 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 101
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 141 SKTSEVNCYRCGESGHLARECT 162
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 109 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 164
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQG-----GVGARDAGF----NRQREKCFEWNRTGQLARDC 283
MSS+ C+KC R+GH+AREC G G+ +R GF + + C+ +G LA+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 143 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKE 289
+CY+C +GH A++C E C+ R G +A+DCKE
Sbjct: 46 ICYRCGESGHLAKDCD----------LQEDVEACYNCGRGGHIAKDCKE 84
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 146 SKTSEVNCYRCGESGHLARECT 167
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 114 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 169
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDC 283
CY C + GH AR+C + +KC+ G + +DC
Sbjct: 93 CYNCGKPGHLARDCD-----------HADEQKCYSCGEFGHIQKDC 127
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQG-----GVGARDAGF----NRQREKCFEWNRTGQLARDC 283
MSS+ C+KC R+GH+AREC G G+ +R GF + + C+ +G LA+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 68 CYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 105
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 145 SKTSEVNCYRCGESGHLARECT 166
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 113 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 168
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQG-----GVGARDAGF----NRQREKCFEWNRTGQLARDC 283
MSS+ C+KC R+GH+AREC G G+ +R GF + + C+ +G LA+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
+ CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 104
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 144 SKTSEVNCYRCGESGHLARECT 165
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 112 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 167
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQG-----GVGARDAGF----NRQREKCFEWNRTGQLARDC 283
MSS+ C+KC R+GH+AREC G G+ +R GF + + C+ +G LA+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
+ CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 104
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 144 SKTSEVNCYRCGESGHLARECT 165
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 112 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 167
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 16/67 (23%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFEWNRT 262
MSS+ C+KC R+GH+AREC GG R GF R + C+ +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 263 GQLARDC 283
G LA+DC
Sbjct: 61 GHLAKDC 67
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 143 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKE 289
+CY+C +GH A++C + Q + C+ R G +A+DCKE
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKE 89
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
+ CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 111
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 174
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 16/67 (23%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFEWNRT 262
MSS+ C+KC R+GH+AREC GG R GF R + C+ +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 263 GQLARDC 283
G LA+DC
Sbjct: 61 GHLAKDC 67
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 143 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKE 289
+CY+C +GH A++C + Q + C+ R G +A+DCKE
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKE 89
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
+ CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 111
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 174
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 16/67 (23%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFEWNRT 262
MSS+ C+KC R+GH+AREC GG R GF R + C+ +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 263 GQLARDC 283
G LA+DC
Sbjct: 61 GHLAKDC 67
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 143 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKE 289
+CY+C +GH A++C ++ E C+ R G +A+DCKE
Sbjct: 53 ICYRCGESGHLAKDCDL-----------QEDEACYNCGRGGHIAKDCKE 90
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 75 CYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 112
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 152 SKTSEVNCYRCGESGHLARECT 173
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 120 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 175
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 16/67 (23%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFEWNRT 262
MSS+ C+KC R+GH+AREC GG R GF R + C+ +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 263 GQLARDC 283
G LA+DC
Sbjct: 61 GHLAKDC 67
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 143 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKE 289
+CY+C +GH A++C ++ E C+ R G +A+DCKE
Sbjct: 53 ICYRCGESGHLAKDCDL-----------QEDEACYNCGRGGHIAKDCKE 90
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 75 CYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 112
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 152 SKTSEVNCYRCGESGHLARECT 173
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 120 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 175
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 16/67 (23%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFEWNRT 262
MSS+ C+KC R+GH+AREC GG R GF R + C+ +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 263 GQLARDC 283
G LA+DC
Sbjct: 61 GHLAKDC 67
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 143 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKE 289
+CY+C +GH A++C + Q + C+ R G +A+DCKE
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKE 89
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
+ CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 111
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 174
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 16/67 (23%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFEWNRT 262
MSS+ C+KC R+GH+AREC GG R GF R + C+ +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 263 GQLARDC 283
G LA+DC
Sbjct: 61 GHLAKDC 67
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 143 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKE 289
+CY+C +GH A++C + Q + C+ R G +A+DCKE
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKE 89
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFEWNRTGQLARDC 283
+ CY C R GH A++C + R+RE+ C+ + G LARDC
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDC 111
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFEWNRTGQLARDCKEE 292
CY C GH ++CT+ G G ++ E C+ +G LAR+C E
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 174
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 140 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKEE 292
++CY C R+GH A++C +D R R+ C+ R G LARDC +
Sbjct: 65 NICYNCGRSGHIAKDC-------KDPKRER-RQHCYTCGRLGHLARDCDRQ 107
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKC 244
MSS + C +GH+AR C +GG G R G + + +C
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGRRGGGHGRGSQC 38
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 125 SKMSSSVCYKCNRTGHFARECT 190
SK S CY+C +GH ARECT
Sbjct: 28 SKTSEVNCYRCGESGHLARECT 49
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKEE 292
CY+C TGH A C++ C+ +G LAR+C E
Sbjct: 14 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIE 51
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQR 235
CY C +GH+A++C Q + A G R R
Sbjct: 854 CYNCGVSGHYAQDCKQSSMEANQQGTYRLR 883
>AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ20281 fis, clone HEP03769. ).
Length = 298
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQR 235
CY C +GH+A++C Q + A G R R
Sbjct: 253 CYNCGVSGHYAQDCKQSSMEANQQGTYRLR 282
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQGGVGARDAGFNRQR 235
CY C +GH+A++C Q + A G R R
Sbjct: 810 CYNCGVSGHYAQDCKQSSMEANQQGTYRLR 839
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.22
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQG 196
CYKC GH+A CT+G
Sbjct: 245 CYKCGEKGHYANRCTKG 261
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.22
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQG 196
CYKC GH+A CT+G
Sbjct: 245 CYKCGEKGHYANRCTKG 261
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.22
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQG 196
CYKC GH+A CT+G
Sbjct: 245 CYKCGEKGHYANRCTKG 261
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 32.7 bits (71), Expect = 0.22
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQG 196
CYKC GH+A CT+G
Sbjct: 219 CYKCGEKGHYANRCTKG 235
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 32.7 bits (71), Expect = 0.22
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQG 196
CYKC GH+A CT+G
Sbjct: 220 CYKCGEKGHYANRCTKG 236
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 140 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRT 262
S CY+C + GH+++EC G R A F Q + + RT
Sbjct: 160 SGCYRCGKEGHWSKECPVDRTG-RVADFTEQYNEQYGAVRT 199
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 140 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRT 262
S CY+C + GH+++EC G R A F Q + + RT
Sbjct: 160 SGCYRCGKEGHWSKECPVDRTG-RVADFTEQYNEQYGAVRT 199
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 30.7 bits (66), Expect = 0.89
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 140 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREK 241
S CY+C +GH + C + +G R+ ++++K
Sbjct: 105 SKCYECGESGHLSYACPKNMLGEREPQKKKEKKK 138
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 30.7 bits (66), Expect = 0.89
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 140 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREK 241
S CY+C +GH + C + +G R+ ++++K
Sbjct: 105 SKCYECGESGHLSYACPKNMLGEREPPKKKEKKK 138
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 30.7 bits (66), Expect = 0.89
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 140 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREK 241
S CY+C +GH + C + +G R+ ++++K
Sbjct: 105 SKCYECGESGHLSYACPKNMLGEREPPKKKEKKK 138
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 30.7 bits (66), Expect = 0.89
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 140 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREK 241
S CY+C +GH + C + +G R+ ++++K
Sbjct: 105 SKCYECGESGHLSYACPKNMLGEREPPKKKEKKK 138
>AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens
cDNA FLJ34176 fis, clone FCBBF3016178. ).
Length = 212
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 146 CYKCNRTGHFARECTQ 193
CY C + GHF +EC Q
Sbjct: 137 CYNCEKPGHFKKECRQ 152
>AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein.
Length = 622
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFAREC 187
M +C++C R GH REC
Sbjct: 503 MRGRICFRCGREGHLMREC 521
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -1
Query: 281 SRAPTARCGSTRSTSPAAG*TQRRGRLRHLACTRGRS 171
SR P R G +RS +PA RRGR R RGRS
Sbjct: 671 SRTPARRSGRSRSRTPA-----RRGRSRSRTPRRGRS 702
>BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein.
Length = 271
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKE 289
M + +CY+C T H +C + V F KCF G L+R C +
Sbjct: 152 MGTGICYRCGSTEHEITKC-KAKVDPALGEF--PFAKCFVCGEMGHLSRSCPD 201
>BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein.
Length = 274
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 131 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTGQLARDCKE 289
M + +CY+C T H +C + V F KCF G L+R C +
Sbjct: 152 MGTGICYRCGSTEHEITKC-KAKVDPALGEF--PFAKCFVCGEMGHLSRSCPD 201
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -1
Query: 281 SRAPTARCGSTRSTSPAAG*TQRRGRLRHLACTRGRS 171
SR P R G +RS +PA RRGR R RGRS
Sbjct: 671 SRTPARRSGRSRSRTPA-----RRGRSRSRTPRRGRS 702
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -1
Query: 281 SRAPTARCGSTRSTSPAAG*TQRRGRLRHLACTRGRS 171
SR P R G +RS +PA RRGR R RGRS
Sbjct: 671 SRTPARRSGRSRSRTPA-----RRGRSRSRTPRRGRS 702
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -1
Query: 281 SRAPTARCGSTRSTSPAAG*TQRRGRLRHLACTRGRS 171
SR P R G +RS +PA RRGR R RGRS
Sbjct: 636 SRTPARRSGRSRSRTPA-----RRGRSRSRTPRRGRS 667
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -1
Query: 281 SRAPTARCGSTRSTSPAAG*TQRRGRLRHLACTRGRS 171
SR P R G +RS +PA RRGR R RGRS
Sbjct: 461 SRTPARRSGRSRSRTPA-----RRGRSRSRTPRRGRS 492
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -1
Query: 281 SRAPTARCGSTRSTSPAAG*TQRRGRLRHLACTRGRS 171
SR P R G +RS +PA RRGR R RGRS
Sbjct: 719 SRTPARRSGRSRSRTPA-----RRGRSRSRTPRRGRS 750
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 28.7 bits (61), Expect = 3.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 140 SVCYKCNRTGHFAREC 187
S CY+C + GH+++EC
Sbjct: 160 SGCYRCGKEGHWSKEC 175
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 128 KMSSSVCYKCNRTGHFARECTQ 193
K + CY C TGH A++C Q
Sbjct: 902 KSGNLSCYNCGATGHRAQDCKQ 923
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 28.7 bits (61), Expect = 3.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 140 SVCYKCNRTGHFAREC 187
S CY+C + GH+++EC
Sbjct: 160 SGCYRCGKEGHWSKEC 175
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 28.7 bits (61), Expect = 3.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 140 SVCYKCNRTGHFAREC 187
S CY+C + GH+++EC
Sbjct: 160 SGCYRCGKEGHWSKEC 175
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 128 KMSSSVCYKCNRTGHFARECTQ 193
K + CY C TGH A++C Q
Sbjct: 785 KSGNLSCYNCGATGHRAQDCKQ 806
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 128 KMSSSVCYKCNRTGHFARECTQ 193
K + CY C TGH A++C Q
Sbjct: 902 KSGNLSCYNCGATGHRAQDCKQ 923
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 128 KMSSSVCYKCNRTGHFARECTQ 193
K + CY C TGH A++C Q
Sbjct: 863 KSGNLSCYNCGATGHRAQDCKQ 884
>M69241-1|AAA36048.1| 328|Homo sapiens insulin-like growth factor
binding protein 2 protein.
Length = 328
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = -1
Query: 290 PPCSRAPTARCGSTRSTSPAAG*TQRRGRLRHLACTRGRSAPSCCTCSI 144
PPC+ A CG R PAA G + C P C CS+
Sbjct: 46 PPCTPERLAACGPPRVAPPAAVAAVAGG--ARMPCAELVREPGCGCCSV 92
>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
(AA -19 to 4525) protein.
Length = 4544
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 188 CTRGRSAPSCCTC 150
CT GR APSC TC
Sbjct: 4365 CTDGRVAPSCLTC 4377
>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) protein.
Length = 4544
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 188 CTRGRSAPSCCTC 150
CT GR APSC TC
Sbjct: 4365 CTDGRVAPSCLTC 4377
>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
protein protein.
Length = 4544
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 188 CTRGRSAPSCCTC 150
CT GR APSC TC
Sbjct: 4365 CTDGRVAPSCLTC 4377
>AB209498-1|BAD92735.1| 2359|Homo sapiens low density
lipoprotein-related protein 1 variant protein.
Length = 2359
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 188 CTRGRSAPSCCTC 150
CT GR APSC TC
Sbjct: 2180 CTDGRVAPSCLTC 2192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,303,545
Number of Sequences: 237096
Number of extensions: 624509
Number of successful extensions: 2464
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2379
length of database: 76,859,062
effective HSP length: 74
effective length of database: 59,313,958
effective search space used: 1364221034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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