Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N17
(289 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 33 0.008
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 30 0.077
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 30 0.077
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 29 0.10
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 27 0.41
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 27 0.54
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 27 0.72
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 27 0.72
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch... 26 1.2
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 25 1.7
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 25 2.2
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 25 2.2
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 25 2.2
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 2.9
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 24 5.0
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 24 5.0
SPBC23G7.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 24 5.0
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 24 5.0
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 24 5.0
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 23 6.7
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 23 6.7
SPAC3F10.15c |spo12||Spo12 family protein|Schizosaccharomyces po... 23 6.7
SPAC23D3.08 |usp108||U1 snRNP-associated protein Usp108|Schizosa... 23 8.8
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 23 8.8
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 23 8.8
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 23 8.8
SPBC28E12.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 23 8.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 23 8.8
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 33.1 bits (72), Expect = 0.008
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 170 LRSNKATVKNKQKQFECKICGKAFKKKYYLQRHRQVHS 283
L+S+ T N + F+C IC K+F +++ +RH Q+H+
Sbjct: 587 LKSHMNTHTN-YRPFQCSICKKSFARQHDKRRHEQLHT 623
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 29.9 bits (64), Expect = 0.077
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 164 KRLRSNKATVKNKQKQFECKICGKAFKKKYYLQRH-RQVH 280
+ LR ++ T +N K F C C +AF + L RH +Q+H
Sbjct: 41 EHLRRHERTHENV-KAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 25.4 bits (53), Expect = 1.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 227 CGKAFKKKYYLQRHRQVHSEL 289
C K+F +K +L+RH + H +
Sbjct: 33 CPKSFTRKEHLRRHERTHENV 53
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 29.9 bits (64), Expect = 0.077
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 200 KQKQFECKICGKAFKKKYYLQRHRQVHS 283
K KQ+ C+ C +AF + +L+RH + H+
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHT 93
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 29.5 bits (63), Expect = 0.10
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 101 DSVLPSQEILQLNMRGGEELPKRLR-SNKATVKNKQ---KQFECKICGKAFKKKYYLQRH 268
+S+ +++I + G + KR + SN+ T + K F C C K FK+ +L+RH
Sbjct: 382 NSMEATEQIGTIGTDGSMKRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRH 441
Query: 269 -RQVHS 283
R +H+
Sbjct: 442 IRSLHT 447
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 27.5 bits (58), Expect = 0.41
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 170 LRSNKATVKNKQKQFECKICGKAFKKKYYLQRH 268
L+ + + + F C CG F K+ LQRH
Sbjct: 253 LKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRH 285
Score = 26.2 bits (55), Expect = 0.95
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 218 CKICGKAFKKKYYLQRHRQVH 280
C ICG+ FK +L+ H +H
Sbjct: 206 CSICGRQFKTAAHLRHHVVLH 226
Score = 25.0 bits (52), Expect = 2.2
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 191 VKNKQKQFECKI--CGKAFKKKYYLQRHRQVHS 283
+++ +K F C CGK + + L++H + HS
Sbjct: 16 LRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHS 48
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 27.1 bits (57), Expect = 0.54
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 164 KRLRSNKATVKNKQKQFECKICGKAFKKKYYLQRHRQVHSE 286
KR + + + +K + F C C K F + L RH+ HS+
Sbjct: 16 KRKLTEPSLIDSK-RVFPCDQCAKRFTRHENLTRHKACHSK 55
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 0.72
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 203 QKQFECKI--CGKAFKKKYYLQRHRQVH 280
++ F C CGKAF + ++RH+++H
Sbjct: 493 ERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.6 bits (56), Expect = 0.72
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 200 KQKQFECKICGKAFKKKYYLQRHRQVHSEL 289
+ K + C++C K +K L+ HR HS L
Sbjct: 395 ENKPYRCEVCSKRYKNLNGLKYHR-THSHL 423
>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
Spo14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 1.2
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 79 NSYGDGRRFCSPITRDSTIKHERWR-GVTKEIKVKQG 186
N D +RF S + D + K++ WR G+ +++K +G
Sbjct: 223 NYIKDSKRFASLVRFDYSSKNQLWRFGMIRDLKNAKG 259
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 224 FYIQIASVCFSLSPCLTLISLVTPLH 147
F+IQ A C SL TL+S+V+ L+
Sbjct: 823 FFIQTAYKCLSLQNFSTLMSIVSALN 848
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 2.2
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = +2
Query: 206 KQFECKICGKAFKKKYYLQRHRQVH 280
+ + C +C F + + L+RH ++H
Sbjct: 471 RPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 25.0 bits (52), Expect = 2.2
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 206 KQFECKICGKAFKKKYYLQRHRQVHS 283
+ ++C +C KAF + + RH + H+
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHT 49
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.0 bits (52), Expect = 2.2
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 7/28 (25%)
Frame = +2
Query: 206 KQFECKICG-------KAFKKKYYLQRH 268
K+F C+ICG KAF K + QRH
Sbjct: 395 KEFPCEICGNYVYMGRKAFDKHFTEQRH 422
Score = 23.0 bits (47), Expect = 8.8
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 194 KNKQKQFECKICGKAFKKKYYLQRHRQ 274
K+ + F C++C K F K + H++
Sbjct: 237 KDSTEAFYCEVCQKFFGKITVFEAHKK 263
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 24.6 bits (51), Expect = 2.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 152 EELPKRLRSNKATVKNKQKQFECKICGKAFKK 247
E+L L S K+ +NK+K+FE I +K
Sbjct: 673 EQLTNELESLKSISRNKEKKFEEAISSLQLEK 704
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 23.8 bits (49), Expect = 5.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 74 IYLKECAIKLRFLYFF 27
+Y K C+I L LYFF
Sbjct: 893 MYFKSCSIGLILLYFF 908
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 23.8 bits (49), Expect = 5.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 221 YIQIASVCFSLSPCLTLISLVTPLHLSC 138
++ I S C L C LI V L LSC
Sbjct: 1003 FLGIVSACEPLIMCPRLIKAVKQLGLSC 1030
>SPBC23G7.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 131
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +2
Query: 152 EELPKRLRSNKATVKNKQKQFECKICGKAFKKKYYL 259
EEL KR + K + E K+C K+ Y+
Sbjct: 88 EELEKRFEESLLKEKATSMEMESKLCSKSITPLEYV 123
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 118 TRDSTIKHERWRGVTKEIKVKQGDSEKQTE 207
T D+T++ + +G K+ ++K+G EK+ E
Sbjct: 204 TGDATVEELQNKGKEKQKELKKGKREKKDE 233
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 236 PFHRFYIQIASVCFSLSPCLTLISLVTPLHLS 141
P HR ++ SVC +L S ++P +L+
Sbjct: 361 PVHRLFVTAFSVCCECLAWTSLFSNISPENLA 392
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 23.4 bits (48), Expect = 6.7
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = -2
Query: 195 FTVALFDLNLFGNSSPPLMFNCRISCDGRT----ESSAISIAILNLPKRMCN*TA-IFVF 31
F + +FD + N P + F C + T +A I + ++PK + + TA + +F
Sbjct: 64 FYMGIFDKEIIDNLPPSVKFICHLGAGYETVDVAACTARGIQVSHVPKAVDDATADVGIF 123
Query: 30 L 28
L
Sbjct: 124 L 124
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 23.4 bits (48), Expect = 6.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 191 VKNKQKQFECKICGKAFKKKYYLQRH 268
+KN+ + F C C K K L+ H
Sbjct: 139 IKNELESFRCLCCHVPCKNKKLLREH 164
>SPAC3F10.15c |spo12||Spo12 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 90
Score = 23.4 bits (48), Expect = 6.7
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 98 EDSVLPSQEILQLNMRGGEELPKRLRSNKATVKNKQKQFECKICGKAFKKKYYLQRHRQV 277
++S Q++LQ + ELPK + + + K+ +A KKKYY++R V
Sbjct: 23 QESATLRQQVLQKH-----ELPKHALNVASPTDSLMSPCTAKL--QAHKKKYYMKRKPPV 75
Query: 278 HS 283
S
Sbjct: 76 MS 77
>SPAC23D3.08 |usp108||U1 snRNP-associated protein
Usp108|Schizosaccharomyces pombe|chr 1|||Manual
Length = 382
Score = 23.0 bits (47), Expect = 8.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 167 SLVTPLHLSCLIVESLVMGEQNLLPS 90
SL L +S LI+ S V+ QNL+PS
Sbjct: 108 SLNINLAVSSLILGSKVLIHQNLIPS 133
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 23.0 bits (47), Expect = 8.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 188 TVKNKQKQFECKICGKAFKKKYYLQ 262
T+ + + Q EC + GKAF++ + +Q
Sbjct: 229 TLTDLKWQLECFLFGKAFERYWKIQ 253
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 112 PITRDSTIKHERWRGVTKEIKVKQGDSEKQTEAI*M*NLWK 234
P ++ +RW KE+K D ++ E + + +WK
Sbjct: 361 PASKKVATSLQRWNDAQKELKDNIPDLSEEEEKLLLHFVWK 401
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 146 LSCLIVESLVMGEQNLLPS 90
LS IV S +MG+ NL+ S
Sbjct: 351 LSLTIVSSFLMGQSNLIAS 369
>SPBC28E12.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 23.0 bits (47), Expect = 8.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 155 PLHLSCLIVESLVMGEQNLL 96
P H+ CL+V+S + ++LL
Sbjct: 73 PKHIECLLVDSKITKTRSLL 92
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 280 VNLSVPLQIIFFFECLSTDFTFKLLLFV 197
+ +++PL IIFF E S + K F+
Sbjct: 3583 ITITLPLNIIFFSEVQSNELENKASKFM 3610
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,177,410
Number of Sequences: 5004
Number of extensions: 21549
Number of successful extensions: 102
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 67723590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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