Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N17
         (289 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    35   7e-04
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    28   0.080
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   0.32 
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   4.0  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    22   5.2  
AY146718-1|AAO12078.1|  149|Anopheles gambiae odorant-binding pr...    21   9.1  
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    21   9.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    21   9.1  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 34.7 bits (76), Expect = 7e-04
 Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +2

Query: 113 PSQEILQLNMRGGEELPKRLRSNKATVKNKQKQFECKICGKAFKKKYYLQRHR-QVH 280
           P+Q+ + +     +  P R   +  T+ ++ ++F+C +C  +++ K   Q+H  +VH
Sbjct: 316 PAQDGVAVASSNNQSQPARTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQKHEYEVH 372



 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +2

Query: 191 VKNKQKQFECKICGKAFKKKYYLQRH-RQVH 280
           + N+    +C IC K F ++   Q H R +H
Sbjct: 374 ISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +2

Query: 152 EELPKRLRSNKATVKNKQKQFECKICGKAFKKKYYLQRHRQVHSE 286
           E   K     K T ++    + C  C     K + L RH + HSE
Sbjct: 107 EPAKKTQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSE 151



 Score = 27.5 bits (58), Expect = 0.11
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 203 QKQFECKICGKAFKKKYYLQRHRQVHS 283
           +K F+C  C  A   K+ L RH ++H+
Sbjct: 237 EKPFQCPHCTYASPDKFKLTRHMRIHT 263



 Score = 27.5 bits (58), Expect = 0.11
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 203 QKQFECKICGKAFKKKYYLQRH 268
           QK ++C  C + F++K  L+RH
Sbjct: 380 QKPYKCDQCAQTFRQKQLLKRH 401


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 197  NKQKQFECKICGKAFKKKYYLQRHRQV-HSEL 289
            ++ +  EC +CG+ F ++  ++ H +V H EL
Sbjct: 918  HRPQSHECPVCGQKFTRRDNMKAHCKVKHPEL 949


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +2

Query: 77   RIAMEMAEDSVLPSQEILQLNMRGGEELPKRLRSNKATVKNKQKQ 211
            R A   A   +LP ++     +   EEL +R R  + T + +Q++
Sbjct: 1162 RQAQRQARAHMLPDRQQNGRAVSSAEELERRRREMERTRRQRQRR 1206


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 173 RSNKATVKNKQKQFECKICGKAFKKKYYLQRHRQVHS 283
           R +KA  + K  QF+ ++ GKA     + ++   V S
Sbjct: 238 RVSKAGTRWKTSQFDSQLFGKALAMTGFARQVNSVES 274


>AY146718-1|AAO12078.1|  149|Anopheles gambiae odorant-binding
           protein AgamOBP13 protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 142 ERWRGVTKEIKVKQGDSEKQTE 207
           E  RG+  E K K+G +++  E
Sbjct: 34  EMLRGLAAECKTKEGATDEDVE 55


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 24  FKEIQKSQFNCTFF*VNLE*LW 89
           +K ++    NCT+   NLE  W
Sbjct: 58  YKNLRDRYTNCTYVDGNLEITW 79


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
          growth factor receptorprotein.
          Length = 1433

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 24 FKEIQKSQFNCTFF*VNLE*LW 89
          +K ++    NCT+   NLE  W
Sbjct: 18 YKNLRDRYTNCTYVDGNLEITW 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,053
Number of Sequences: 2352
Number of extensions: 5350
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17384760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)