Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N16
         (203 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            22   3.0  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    21   4.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    21   5.3  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             21   7.0  

>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 63  NNQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQAT 179
           + Q  LKR+   +    R  PA+ SA   G+ L + Q T
Sbjct: 162 SKQRELKRMELAMVKQYRPDPAKASAPSAGKSLSNIQPT 200


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 63  NNQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQAT 179
           + Q  LKR+   +    R  PA+ SA   G+ L + Q T
Sbjct: 162 SKQRELKRMELAMVKQYRPDPAKASAPNAGKSLSNIQPT 200


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -3

Query: 42  FQLDNETVSQ 13
           F++DN+TVSQ
Sbjct: 107 FEIDNQTVSQ 116


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 153 EDLFHWQATIMGPVDS 200
           EDL  WQ  ++G  +S
Sbjct: 251 EDLDEWQTKVVGVTES 266


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,616
Number of Sequences: 2352
Number of extensions: 3579
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 45
effective length of database: 458,139
effective search space used: 10079058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)