Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N16
         (203 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   0.36 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   1.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   2.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   2.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   2.6  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    19   4.5  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    19   4.5  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    19   4.5  
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    19   4.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   4.5  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    19   7.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 0.36
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 149 VWSCGTLCWWISS 111
           VWS G +CW + S
Sbjct: 821 VWSMGIVCWEVMS 833


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 1.5
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 15  GSQFRCLVESQFIP**NNQMALKRINRELQDLGRDPPAQCSAGPHG 152
           G+ F C     ++P  NNQ + +   R + DL  D     ++GP G
Sbjct: 679 GNPFNCNCSMDWLPGINNQTSTREYPR-IMDL--DNVMCRTSGPRG 721



 Score = 18.6 bits (36), Expect = 7.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 143 SCGTLCWWIS 114
           S GT C W+S
Sbjct: 26  SAGTSCKWLS 35


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 2.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 148 CGPAEHCAGGSLP 110
           CGP E   G +LP
Sbjct: 20  CGPPEEETGSNLP 32


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 2.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 148 CGPAEHCAGGSLP 110
           CGP E   G +LP
Sbjct: 20  CGPPEEETGSNLP 32


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 2.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 148 CGPAEHCAGGSLP 110
           CGP E   G +LP
Sbjct: 20  CGPPEEETGSNLP 32


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 142 DHTAKICFIGKPQLWVQLTA 201
           D   +     KP++WV L A
Sbjct: 87  DKVVQFLIDNKPEIWVLLEA 106


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 142 DHTAKICFIGKPQLWVQLTA 201
           D   +     KP++WV L A
Sbjct: 87  DKVVQFLIDNKPEIWVLLEA 106


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
 Frame = +3

Query: 6   RVLGSQF----RCLVESQFIP**NNQMA 77
           R LG  F    RC + S F+P   +Q+A
Sbjct: 136 RALGPSFSTGERCRISSNFLPNKMHQVA 163


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 58

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +1

Query: 139 QDHTAKICFIGKPQ 180
           ++ +A++C+ G PQ
Sbjct: 34  KEQSAQVCYRGAPQ 47


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +1

Query: 139 QDHTAKICFIGKPQ 180
           ++ +A++C+ G PQ
Sbjct: 34  KEQSAQVCYRGAPQ 47


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 3/13 (23%), Positives = 10/13 (76%)
 Frame = +1

Query: 40  KVSLFHNKIIKWR 78
           K +++H  +++W+
Sbjct: 132 KATIYHQGLVEWK 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,231
Number of Sequences: 438
Number of extensions: 982
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2785926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)