Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N15
(253 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47357-6|CAA87426.2| 187|Caenorhabditis elegans Hypothetical pr... 46 4e-06
Z47357-7|CAD90185.1| 191|Caenorhabditis elegans Hypothetical pr... 44 1e-05
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 25 7.1
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 25 7.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 25 7.1
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 25 7.1
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 25 7.1
U64858-6|AAB18283.2| 392|Caenorhabditis elegans Hypothetical pr... 25 7.1
AL023847-3|CAA19549.2| 309|Caenorhabditis elegans Hypothetical ... 25 9.4
>Z47357-6|CAA87426.2| 187|Caenorhabditis elegans Hypothetical
protein ZK1128.8a protein.
Length = 187
Score = 46.0 bits (104), Expect = 4e-06
Identities = 16/31 (51%), Positives = 28/31 (90%)
Frame = +2
Query: 161 MLVLVLGDLHIPHRCSSLAPKFKKLLLPGRI 253
MLVL++GD ++PHR ++++PKF+KLL+P ++
Sbjct: 1 MLVLLIGDFNLPHRAANISPKFRKLLVPNKM 31
>Z47357-7|CAD90185.1| 191|Caenorhabditis elegans Hypothetical
protein ZK1128.8b protein.
Length = 191
Score = 44.0 bits (99), Expect = 1e-05
Identities = 15/30 (50%), Positives = 27/30 (90%)
Frame = +2
Query: 164 LVLVLGDLHIPHRCSSLAPKFKKLLLPGRI 253
LVL++GD ++PHR ++++PKF+KLL+P ++
Sbjct: 6 LVLLIGDFNLPHRAANISPKFRKLLVPNKM 35
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 101 FFACKELVDYKQLLFILHSKMLVLVLGDL 187
F CKELVD + I VL++ DL
Sbjct: 5428 FKGCKELVDTSKYTLINKGDKQVLIINDL 5456
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 101 FFACKELVDYKQLLFILHSKMLVLVLGDL 187
F CKELVD + I VL++ DL
Sbjct: 5957 FKGCKELVDTSKYTLINKGDKQVLIINDL 5985
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 101 FFACKELVDYKQLLFILHSKMLVLVLGDL 187
F CKELVD + I VL++ DL
Sbjct: 5638 FKGCKELVDTSKYTLINKGDKQVLIINDL 5666
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 101 FFACKELVDYKQLLFILHSKMLVLVLGDL 187
F CKELVD + I VL++ DL
Sbjct: 5428 FKGCKELVDTSKYTLINKGDKQVLIINDL 5456
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 101 FFACKELVDYKQLLFILHSKMLVLVLGDL 187
F CKELVD + I VL++ DL
Sbjct: 5957 FKGCKELVDTSKYTLINKGDKQVLIINDL 5985
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 101 FFACKELVDYKQLLFILHSKMLVLVLGDL 187
F CKELVD + I VL++ DL
Sbjct: 5638 FKGCKELVDTSKYTLINKGDKQVLIINDL 5666
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 101 FFACKELVDYKQLLFILHSKMLVLVLGDL 187
F CKELVD + I VL++ DL
Sbjct: 4847 FKGCKELVDTSKYTLINKGDKQVLIINDL 4875
>U64858-6|AAB18283.2| 392|Caenorhabditis elegans Hypothetical
protein C16D9.5 protein.
Length = 392
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 156 ECNINNSCL*STNSLHAKNNITPTGVYRIYRFYRNCKYINKNISLN 19
E N N S S + N T + + +Y+FY N K+I ++ LN
Sbjct: 138 EKNSKNMVFVSAVSENHFNEATHS-IGSVYKFYHNAKFILYSLGLN 182
>AL023847-3|CAA19549.2| 309|Caenorhabditis elegans Hypothetical
protein Y57A10C.7 protein.
Length = 309
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +3
Query: 123 LIINSYYLYC-----IPKCWSSYLAIYISLIDAVV*LQSL 227
+I+NSY +YC IP + LA+Y+++ D L +L
Sbjct: 29 MIVNSYTIYCFWRKKIPCAENLRLALYLAIGDLAYALAAL 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,636,786
Number of Sequences: 27780
Number of extensions: 105362
Number of successful extensions: 227
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 219801160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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