Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N15
(253 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 0.78
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 1.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 2.4
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 2.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 4.2
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 20 5.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 5.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 7.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 19 7.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 19 7.3
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 19 9.6
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 0.78
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 150 NINNSCL*STNSLHAKNN 97
N NSCL ST + ++K+N
Sbjct: 374 NRRNSCLGSTETYYSKHN 391
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 1.4
Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -2
Query: 69 YRF-YRNCKYINKNISLNHNN 10
Y++ Y N Y N N + N+NN
Sbjct: 329 YKYNYNNNNYNNNNYNNNYNN 349
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.0 bits (42), Expect = 2.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 155 SKMLVLVLGDLHIPH 199
SKM V+ L DLH P+
Sbjct: 390 SKMEVMELSDLHHPN 404
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.0 bits (42), Expect = 2.4
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 117 SLHAKNNITPTGVYRIYRFYRNCKYINKN 31
S + +NNI G+ I+ + K ++KN
Sbjct: 287 SQYEENNIEYEGIQDIFNTQSSAKVMSKN 315
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 4.2
Identities = 9/30 (30%), Positives = 11/30 (36%)
Frame = -2
Query: 126 STNSLHAKNNITPTGVYRIYRFYRNCKYIN 37
S ++H NN Y Y N Y N
Sbjct: 319 SNKTIHNNNNYNNNNYNNNYNNYNNNNYNN 348
Score = 19.4 bits (38), Expect = 7.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -2
Query: 60 YRNCKYINKNISLNHNN 10
+ N Y N N + N+NN
Sbjct: 324 HNNNNYNNNNYNNNYNN 340
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 19.8 bits (39), Expect = 5.5
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +3
Query: 117 NWLIINSYYLY 149
NW+I NS+ ++
Sbjct: 32 NWIITNSFIIF 42
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.8 bits (39), Expect = 5.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -3
Query: 218 ELDYCIYEGYVDRQV 174
E DY + GY+D ++
Sbjct: 769 EYDYELSRGYIDEKI 783
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.4 bits (38), Expect = 7.3
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -2
Query: 54 NCKYINKNISLNHNN 10
N Y N N N+NN
Sbjct: 321 NYNYNNNNYKYNYNN 335
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 19.4 bits (38), Expect = 7.3
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 141 YLYCIPKCWSSYLAIYI 191
Y C+ CW++ I I
Sbjct: 102 YATCVLSCWTNIYYIII 118
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 19.4 bits (38), Expect = 7.3
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 141 YLYCIPKCWSSYLAIYI 191
Y C+ CW++ I I
Sbjct: 155 YATCVLSCWTNIYYIII 171
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 19.0 bits (37), Expect = 9.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 92 VILFFACKELVDYKQLLFI 148
VILFF C ++LL++
Sbjct: 276 VILFFICWAPFHTQRLLYV 294
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,529
Number of Sequences: 438
Number of extensions: 1440
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4527252
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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