Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N14
         (215 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005288-1|AAH05288.1|  260|Homo sapiens TGF beta-inducible nucl...    39   0.003
AY443419-1|AAS00024.1|  260|Homo sapiens TGF-beta inducible nucl...    39   0.003
AJ012409-1|CAA10008.1|  260|Homo sapiens hypothetical protein pr...    39   0.003
AF372458-1|AAK53761.1|  260|Homo sapiens hairy cell leukemia pro...    39   0.003
AF077615-1|AAG43048.1|  260|Homo sapiens TGF beta inducible nucl...    39   0.003
AK125515-1|BAC86189.1|  166|Homo sapiens protein ( Homo sapiens ...    27   8.3  

>BC005288-1|AAH05288.1|  260|Homo sapiens TGF beta-inducible nuclear
           protein 1 protein.
          Length = 260

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +2

Query: 50  MPQNEYIERHQKLYGRRLDY 109
           MPQNEYIE H+K YG RLDY
Sbjct: 1   MPQNEYIELHRKRYGYRLDY 20


>AY443419-1|AAS00024.1|  260|Homo sapiens TGF-beta inducible nuclear
           protein protein.
          Length = 260

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +2

Query: 50  MPQNEYIERHQKLYGRRLDY 109
           MPQNEYIE H+K YG RLDY
Sbjct: 1   MPQNEYIELHRKRYGYRLDY 20


>AJ012409-1|CAA10008.1|  260|Homo sapiens hypothetical protein
           protein.
          Length = 260

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +2

Query: 50  MPQNEYIERHQKLYGRRLDY 109
           MPQNEYIE H+K YG RLDY
Sbjct: 1   MPQNEYIELHRKRYGYRLDY 20


>AF372458-1|AAK53761.1|  260|Homo sapiens hairy cell leukemia
           protein 1 protein.
          Length = 260

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +2

Query: 50  MPQNEYIERHQKLYGRRLDY 109
           MPQNEYIE H+K YG RLDY
Sbjct: 1   MPQNEYIELHRKRYGYRLDY 20


>AF077615-1|AAG43048.1|  260|Homo sapiens TGF beta inducible nuclear
           protein TINP1 protein.
          Length = 260

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +2

Query: 50  MPQNEYIERHQKLYGRRLDY 109
           MPQNEYIE H+K YG RLDY
Sbjct: 1   MPQNEYIELHRKRYGYRLDY 20


>AK125515-1|BAC86189.1|  166|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43527 fis, clone PLACE6009006. ).
          Length = 166

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 187 LIPCSLRAFSALLMGFTRFFFAFPL 113
           L PCSLR F  LL+  T F  + PL
Sbjct: 77  LWPCSLRLFKLLLLSRTLFHISQPL 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,842,356
Number of Sequences: 237096
Number of extensions: 430866
Number of successful extensions: 921
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 76,859,062
effective HSP length: 50
effective length of database: 65,004,262
effective search space used: 1365089502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)