Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N14
(215 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56257-1|AAC32928.1| 259|Drosophila melanogaster intronic prote... 46 7e-06
AY118472-1|AAM49841.1| 259|Drosophila melanogaster GM13959p pro... 46 7e-06
AE014134-1874|AAF52940.2| 259|Drosophila melanogaster CG5277-PA... 46 7e-06
BT030309-1|ABN49448.1| 846|Drosophila melanogaster RE10183p pro... 27 3.6
AE014298-1760|AAF48158.1| 659|Drosophila melanogaster CG15732-P... 27 3.6
AY126933-1|AAM80991.1| 225|Drosophila melanogaster centromeric ... 27 4.7
AY126932-1|AAM80990.1| 225|Drosophila melanogaster centromeric ... 27 4.7
AY126931-1|AAM80989.1| 225|Drosophila melanogaster centromeric ... 27 4.7
AY126930-1|AAM80988.1| 225|Drosophila melanogaster centromeric ... 27 4.7
AY126929-1|AAM80987.1| 225|Drosophila melanogaster centromeric ... 27 4.7
AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p pro... 27 4.7
AF259371-1|AAF72652.1| 225|Drosophila melanogaster centromeric ... 27 4.7
AE014297-4769|AAN14276.1| 282|Drosophila melanogaster CG11525-P... 27 4.7
AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-P... 27 4.7
AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-P... 27 4.7
AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-P... 27 4.7
AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-P... 27 4.7
AE013599-1721|AAF58371.2| 225|Drosophila melanogaster CG13329-P... 27 4.7
AE013599-1038|AAF58834.3| 381|Drosophila melanogaster CG33478-P... 26 6.2
AY128465-1|AAM75058.1| 254|Drosophila melanogaster RE21270p pro... 26 8.2
AY118771-1|AAM50631.1| 486|Drosophila melanogaster GH11218p pro... 26 8.2
AE014134-949|AAF52272.2| 486|Drosophila melanogaster CG18266-PA... 26 8.2
>U56257-1|AAC32928.1| 259|Drosophila melanogaster intronic protein
259 protein.
Length = 259
Score = 46.0 bits (104), Expect = 7e-06
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 50 MPQNEYIERHQKLYGRRLDY 109
MPQNEY+ERH+KLYGRRLDY
Sbjct: 1 MPQNEYMERHRKLYGRRLDY 20
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 126 KKKRVNPIRRAEKARKLQGIKAKIY 200
KK+ P RA KARKL+GIKAK++
Sbjct: 26 KKEARLPKDRARKARKLRGIKAKLF 50
>AY118472-1|AAM49841.1| 259|Drosophila melanogaster GM13959p
protein.
Length = 259
Score = 46.0 bits (104), Expect = 7e-06
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 50 MPQNEYIERHQKLYGRRLDY 109
MPQNEY+ERH+KLYGRRLDY
Sbjct: 1 MPQNEYMERHRKLYGRRLDY 20
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 126 KKKRVNPIRRAEKARKLQGIKAKIY 200
KK+ P RA KARKL+GIKAK++
Sbjct: 26 KKEARLPKDRARKARKLRGIKAKLF 50
>AE014134-1874|AAF52940.2| 259|Drosophila melanogaster CG5277-PA
protein.
Length = 259
Score = 46.0 bits (104), Expect = 7e-06
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 50 MPQNEYIERHQKLYGRRLDY 109
MPQNEY+ERH+KLYGRRLDY
Sbjct: 1 MPQNEYMERHRKLYGRRLDY 20
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 126 KKKRVNPIRRAEKARKLQGIKAKIY 200
KK+ P RA KARKL+GIKAK++
Sbjct: 26 KKEARLPKDRARKARKLRGIKAKLF 50
>BT030309-1|ABN49448.1| 846|Drosophila melanogaster RE10183p
protein.
Length = 846
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +3
Query: 18 CRRKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEKARKLQGIKAKI 197
C ++ PQ R + L+A+ S DG + RR + + + R ++ R+ Q +
Sbjct: 48 CAESGGSQDPQTNRLHSLDAVPS---DGTLARRRHGSRDSLRRNRLLQRQRRSQSAAVRS 104
Query: 198 YQ 203
++
Sbjct: 105 HR 106
>AE014298-1760|AAF48158.1| 659|Drosophila melanogaster CG15732-PA
protein.
Length = 659
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 95 CRKAFDGVQYIRSAALWLLSGRLTP 21
CR +G +R A LWL SG L P
Sbjct: 8 CRDIHNGHSVMRFAILWLFSGCLLP 32
>AY126933-1|AAM80991.1| 225|Drosophila melanogaster centromeric
histone H3-like proteinCid protein.
Length = 225
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 24 RKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEK 164
R + PQ RR + K+ A + + ++K NP+ RA++
Sbjct: 86 RYPTTRSPQTRRMTVQQESKTRAAGPVAAQNQTRRRKAANPMSRAKR 132
>AY126932-1|AAM80990.1| 225|Drosophila melanogaster centromeric
histone H3-like proteinCid protein.
Length = 225
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 24 RKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEK 164
R + PQ RR + K+ A + + ++K NP+ RA++
Sbjct: 86 RYPTTRSPQTRRMTVQQESKTRAAGPVTSQNQTRRRKAANPMSRAKR 132
>AY126931-1|AAM80989.1| 225|Drosophila melanogaster centromeric
histone H3-like proteinCid protein.
Length = 225
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 24 RKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEK 164
R + PQ RR + K+ A + + ++K NP+ RA++
Sbjct: 86 RYPTTRSPQTRRMTVQQESKTRAAGPVAAQNQTRRRKAANPMSRAKR 132
>AY126930-1|AAM80988.1| 225|Drosophila melanogaster centromeric
histone H3-like proteinCid protein.
Length = 225
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 24 RKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEK 164
R + PQ RR + K+ A + + ++K NP+ RA++
Sbjct: 86 RYPTTRSPQTRRMTVQQESKTRAAGPVAAQNQTRRRKAANPMSRAKR 132
>AY126929-1|AAM80987.1| 225|Drosophila melanogaster centromeric
histone H3-like proteinCid protein.
Length = 225
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 24 RKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEK 164
R + PQ RR + K+ A + + ++K NP+ RA++
Sbjct: 86 RYPTTRSPQTRRMTVQQESKTRAAGPVAAQNQTRRRKAANPMSRAKR 132
>AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p
protein.
Length = 566
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 112 LIIKPSAVKLLMAFNIFVLRHCGCLAADLRR 20
L IK +K + A ++ + CGC A DL R
Sbjct: 325 LAIKQLDLKPIPAEDLVTISQCGCTAGDLER 355
>AF259371-1|AAF72652.1| 225|Drosophila melanogaster centromeric
histone H3-like proteinCid protein.
Length = 225
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 24 RKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEK 164
R + PQ RR + K+ A + + ++K NP+ RA++
Sbjct: 86 RYPTTRSPQTRRMTVQQESKTRAAGPVAAQNQTRRRKAANPMSRAKR 132
>AE014297-4769|AAN14276.1| 282|Drosophila melanogaster CG11525-PE,
isoform E protein.
Length = 282
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 112 LIIKPSAVKLLMAFNIFVLRHCGCLAADLRR 20
L IK +K + A ++ + CGC A DL R
Sbjct: 41 LAIKQLDLKPIPAEDLVTISQCGCTAGDLER 71
>AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-PD,
isoform D protein.
Length = 566
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 112 LIIKPSAVKLLMAFNIFVLRHCGCLAADLRR 20
L IK +K + A ++ + CGC A DL R
Sbjct: 325 LAIKQLDLKPIPAEDLVTISQCGCTAGDLER 355
>AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-PC,
isoform C protein.
Length = 566
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 112 LIIKPSAVKLLMAFNIFVLRHCGCLAADLRR 20
L IK +K + A ++ + CGC A DL R
Sbjct: 325 LAIKQLDLKPIPAEDLVTISQCGCTAGDLER 355
>AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-PB,
isoform B protein.
Length = 566
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 112 LIIKPSAVKLLMAFNIFVLRHCGCLAADLRR 20
L IK +K + A ++ + CGC A DL R
Sbjct: 325 LAIKQLDLKPIPAEDLVTISQCGCTAGDLER 355
>AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-PA,
isoform A protein.
Length = 566
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 112 LIIKPSAVKLLMAFNIFVLRHCGCLAADLRR 20
L IK +K + A ++ + CGC A DL R
Sbjct: 325 LAIKQLDLKPIPAEDLVTISQCGCTAGDLER 355
>AE013599-1721|AAF58371.2| 225|Drosophila melanogaster CG13329-PA
protein.
Length = 225
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 24 RKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEK 164
R + PQ RR + K+ A + + ++K NP+ RA++
Sbjct: 86 RYPTTRSPQTRRMTVQQESKTRAAGPVAAQNQTRRRKAANPMSRAKR 132
>AE013599-1038|AAF58834.3| 381|Drosophila melanogaster CG33478-PA,
isoform A protein.
Length = 381
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 212 RSLLVDLGFNTL*FTSLLSPSYGVHALLFCVSS 114
R+L LGF+ + F+S+++ SY ALL V+S
Sbjct: 349 RTLNPSLGFDLMLFSSIVNCSYSYFALLKRVNS 381
>AY128465-1|AAM75058.1| 254|Drosophila melanogaster RE21270p
protein.
Length = 254
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 39 KQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEK 164
+ PQ RR + K+ A + + ++K NP+ RA++
Sbjct: 120 RSPQTRRMTVQQESKTRAAGPVAAQNQTRRRKAANPMSRAKR 161
>AY118771-1|AAM50631.1| 486|Drosophila melanogaster GH11218p
protein.
Length = 486
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 15 WCRRKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEKARKLQGIKAK 194
WCRRK +Q Q +R + S ++ G + A ++V+P + +K + K +
Sbjct: 348 WCRRKE--EQQQQQRQKQKKSSTSSSSLGSVSSSSTAPTRKVSPENTKNRLQKWEQAKRE 405
Query: 195 IYQ 203
Q
Sbjct: 406 QQQ 408
>AE014134-949|AAF52272.2| 486|Drosophila melanogaster CG18266-PA
protein.
Length = 486
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 15 WCRRKSAAKQPQCRRTNILNAIKSFTADGLIMRRGNAKKKRVNPIRRAEKARKLQGIKAK 194
WCRRK +Q Q +R + S ++ G + A ++V+P + +K + K +
Sbjct: 348 WCRRKE--EQQQQQRQKQKKSSTSSSSLGSVSSSSTAPTRKVSPENTKNRLQKWEQAKRE 405
Query: 195 IYQ 203
Q
Sbjct: 406 QQQ 408
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,139,557
Number of Sequences: 53049
Number of extensions: 133582
Number of successful extensions: 344
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 24,988,368
effective HSP length: 51
effective length of database: 22,282,869
effective search space used: 445657380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -