Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N14
(215 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical pr... 36 0.004
AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical ... 36 0.004
Z79603-5|CAB01891.1| 435|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z66494-6|CAE48497.1| 423|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical pr... 26 4.2
U23515-1|AAK21454.2| 511|Caenorhabditis elegans Hypothetical pr... 26 4.2
AY523516-1|AAR98638.1| 459|Caenorhabditis elegans acetylcholine... 26 4.2
AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine... 26 4.2
AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine r... 26 4.2
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 26 4.2
Z50016-11|CAL22700.1| 157|Caenorhabditis elegans Hypothetical p... 25 5.5
Z50016-10|CAL22699.1| 264|Caenorhabditis elegans Hypothetical p... 25 5.5
Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 25 5.5
Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 25 5.5
U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical pr... 25 5.5
AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GA... 25 5.5
AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GA... 25 5.5
AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine re... 25 5.5
U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine rece... 25 7.3
Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical pr... 25 9.7
U41749-3|AAB52485.2| 120|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF047658-4|AAC04417.1| 392|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 35.9 bits (79), Expect = 0.004
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 50 MPQNEYIERHQKLYGRRLDY 109
MPQNE+IE H+K +GRRLD+
Sbjct: 1 MPQNEHIELHRKRHGRRLDH 20
>AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 35.9 bits (79), Expect = 0.004
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 50 MPQNEYIERHQKLYGRRLDY 109
MPQNE+IE H+K +GRRLD+
Sbjct: 1 MPQNEHIELHRKRHGRRLDH 20
>Z79603-5|CAB01891.1| 435|Caenorhabditis elegans Hypothetical
protein M163.5 protein.
Length = 435
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 87 FTADGLIMRRGNAKKKRVN-PIRRAEKARKLQGIK 188
+ ADG I G AKKKR N PI E+ + IK
Sbjct: 183 YDADGFIAPLGPAKKKRKNAPIAANEQQNDVTFIK 217
>Z66494-6|CAE48497.1| 423|Caenorhabditis elegans Hypothetical
protein C34C6.5b protein.
Length = 423
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 173 FTSLLSPSYGVHALLFCVSSPHNQAVCRKAFDGVQYIRSAALWLLSGRLTPTPCHPR 3
+ S LS +G+ A + S +++ F + +IRS L GRLT P P+
Sbjct: 186 YASFLSIGWGLMADIDIDSEKWRKSLGHHRFTVMGFIRSCNLRSYKGRLTYRPYKPK 242
>Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical
protein C34C6.5a protein.
Length = 473
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 173 FTSLLSPSYGVHALLFCVSSPHNQAVCRKAFDGVQYIRSAALWLLSGRLTPTPCHPR 3
+ S LS +G+ A + S +++ F + +IRS L GRLT P P+
Sbjct: 236 YASFLSIGWGLMADIDIDSEKWRKSLGHHRFTVMGFIRSCNLRSYKGRLTYRPYKPK 292
>Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical
protein R06A4.10b protein.
Length = 511
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 63 NILNAIKSFTADG--LIMRRGNAKKKRVNPIRRAEKARKLQGIKAKIYQ 203
NI A+ F LIM++ A+K R +RR + RK Q + ++Y+
Sbjct: 303 NIARAVNRFIRMEMPLIMKQAYAQKAREEKLRRQQMGRK-QSLWTRVYK 350
>Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical
protein R06A4.10a protein.
Length = 514
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 63 NILNAIKSFTADG--LIMRRGNAKKKRVNPIRRAEKARKLQGIKAKIYQ 203
NI A+ F LIM++ A+K R +RR + RK Q + ++Y+
Sbjct: 303 NIARAVNRFIRMEMPLIMKQAYAQKAREEKLRRQQMGRK-QSLWTRVYK 350
>U23515-1|AAK21454.2| 511|Caenorhabditis elegans Hypothetical
protein R144.5 protein.
Length = 511
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 18 CRRKSAAKQPQCRRTNILN--AIKSFTADGLIMRRGNAKKK 134
C R K + R +N A+K+FT DG ++ N K+K
Sbjct: 386 CNRNETGKLARWRNVLDMNRSALKTFTYDGSLLAGLNKKRK 426
>AY523516-1|AAR98638.1| 459|Caenorhabditis elegans acetylcholine
receptor alternativevariant b protein.
Length = 459
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 63 NILNAIKSFTADG--LIMRRGNAKKKRVNPIRRAEKARKLQGIKAKIYQ 203
NI A+ F LIM++ A+K R +RR + RK Q + ++Y+
Sbjct: 248 NIARAVNRFIRMEMPLIMKQAYAQKAREEKLRRQQMGRK-QSLWTRVYK 295
>AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine
receptor 20 (63.9kD) alternative variant a protein.
Length = 553
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 63 NILNAIKSFTADG--LIMRRGNAKKKRVNPIRRAEKARKLQGIKAKIYQ 203
NI A+ F LIM++ A+K R +RR + RK Q + ++Y+
Sbjct: 345 NIARAVNRFIRMEMPLIMKQAYAQKAREEKLRRQQMGRK-QSLWTRVYK 392
>AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine
receptor, class t protein7 protein.
Length = 353
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 190 ALIPCSLRAFSALLMGFTRFFFAFPLLII 104
A+I C+ A A + F FF+A P LII
Sbjct: 244 AVILCAFHAVVAGIYEFMMFFYASPSLII 272
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 119 SSPHNQAVCRKAFDGVQYIRSAALWLLSGRLTP 21
S H+ V K DG YI S +L S L+P
Sbjct: 102 SGVHDSGVLHKNADGAYYIPSGSLRTTSSTLSP 134
>Z50016-11|CAL22700.1| 157|Caenorhabditis elegans Hypothetical
protein T21C12.1i protein.
Length = 157
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 128 FCVSSPHNQAVCRKAFDGVQYIRSAALWLL 39
FCVS H V R AF V + + WL+
Sbjct: 103 FCVSHSHIDIVSRAAFPLVFILFNTLFWLI 132
>Z50016-10|CAL22699.1| 264|Caenorhabditis elegans Hypothetical
protein T21C12.1h protein.
Length = 264
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 128 FCVSSPHNQAVCRKAFDGVQYIRSAALWLL 39
FCVS H V R AF V + + WL+
Sbjct: 210 FCVSHSHIDIVSRAAFPLVFILFNTLFWLI 239
>Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical
protein T21C12.1f protein.
Length = 448
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 128 FCVSSPHNQAVCRKAFDGVQYIRSAALWLL 39
FCVS H V R AF V + + WL+
Sbjct: 394 FCVSHSHIDIVSRAAFPLVFILFNTLFWLI 423
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical protein
T21C12.1a protein.
Length = 1106
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 128 FCVSSPHNQAVCRKAFDGVQYIRSAALWLL 39
FCVS H V R AF V + + WL+
Sbjct: 1052 FCVSHSHIDIVSRAAFPLVFILFNTLFWLI 1081
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 73 FNIFVLRHCGCLAADLRRHHATLV 2
F++FV+ G L + LR HA+LV
Sbjct: 143 FSVFVMIQRGYLESQLRSQHASLV 166
>Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical
protein T05H10.5b protein.
Length = 984
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 73 FNIFVLRHCGCLAADLRRHHATLV 2
F++FV+ G L + LR HA+LV
Sbjct: 147 FSVFVMIQRGYLESQLRSQHASLV 170
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 73 FNIFVLRHCGCLAADLRRHHATLV 2
F++FV+ G L + LR HA+LV
Sbjct: 143 FSVFVMIQRGYLESQLRSQHASLV 166
>U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical
protein B0244.6 protein.
Length = 982
Score = 25.4 bits (53), Expect = 5.5
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -2
Query: 184 IPCSLRAFSAL--LMGFTRFFFAFPLLIIKPSAVKLLMAFNIFVLRHCGCLAADLRRHHA 11
I C + S + L+ F FAF + II S V + ++F+I + G + HHA
Sbjct: 797 IKCDSQVCSPIVGLINFIIVSFAFLITIIILSFVFICLSFHIRKAKKLGSYTSSQTLHHA 856
>AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49Cshort protein.
Length = 264
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 128 FCVSSPHNQAVCRKAFDGVQYIRSAALWLL 39
FCVS H V R AF V + + WL+
Sbjct: 210 FCVSHSHIDIVSRAAFPLVFILFNTLFWLI 239
>AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49C protein.
Length = 448
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 128 FCVSSPHNQAVCRKAFDGVQYIRSAALWLL 39
FCVS H V R AF V + + WL+
Sbjct: 394 FCVSHSHIDIVSRAAFPLVFILFNTLFWLI 423
>AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine
receptor, class t protein24 protein.
Length = 362
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -2
Query: 190 ALIPCSLRAFSALLMGFTRFFFAFPLLII 104
+++ CS A +A + + +FF A PL+I+
Sbjct: 259 SVLICSFNAIAAYIYVYMQFFSASPLVIL 287
>U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine
receptor, class t protein14 protein.
Length = 337
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 196 ILALIPCSLRAFSALLMGFTRFFFAFPLLII 104
I A+I CS A +A + + +FF + P LII
Sbjct: 223 IQAVILCSFHAIAAYIYVYMQFFPSPPWLII 253
>Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical
protein F19H6.3 protein.
Length = 914
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 114 RGNAKKKRVNPIRRAEKARKLQGIKAK 194
R +KR NP RR+E+ ++Q +K
Sbjct: 389 RSKLARKRSNPTRRSERLSEIQNNASK 415
>U41749-3|AAB52485.2| 120|Caenorhabditis elegans Hypothetical
protein F09E10.6 protein.
Length = 120
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 128 FCVSSPHNQAVCRKAFDGVQY 66
FC+ P N V R+ ++G QY
Sbjct: 46 FCLKLPSNGHVGRRHYEGAQY 66
>AF047658-4|AAC04417.1| 392|Caenorhabditis elegans Hypothetical
protein K03H6.1 protein.
Length = 392
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 167 SLLSPSYGVHALLFCVSSPHNQAVCRKA 84
SL+ ++ +LFC+SS H + C KA
Sbjct: 324 SLVVTGKTINFILFCLSSEHFRQKCFKA 351
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,522,469
Number of Sequences: 27780
Number of extensions: 65330
Number of successful extensions: 206
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 12,740,198
effective HSP length: 51
effective length of database: 11,323,418
effective search space used: 226468360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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