Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N11
(202 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 28 0.20
SPCC13B11.03c |||hydroxyacylglutathione hydrolase |Schizosacchar... 26 0.79
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 25 1.8
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 25 1.8
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 25 1.8
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 23 5.5
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 23 7.3
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 23 7.3
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 23 7.3
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 22 9.7
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 22 9.7
SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3 Rfp1|Schizo... 22 9.7
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 22 9.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 22 9.7
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 22 9.7
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.9 bits (59), Expect = 0.20
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 92 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
D VE+ DAA E ++ E K+ KKS +KK + P+
Sbjct: 29 DGKVEENDAAEEGASNGEKKKKKKKKS-SKKKKTPQ 63
>SPCC13B11.03c |||hydroxyacylglutathione hydrolase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 0.79
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 68 KKKIRNKELKLQHVLRT 18
KKK++NKE+ LQ +L T
Sbjct: 46 KKKLKNKEIDLQAILTT 62
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 24.6 bits (51), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 124 GCGVLLFNCCVCHYYY*VSKRKLEIKN*NYST 29
G VL N +C YY V + E+ N +Y T
Sbjct: 82 GIDVLWLNSGICQSYYTVMEAPEEVWNAHYQT 113
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 24.6 bits (51), Expect = 1.8
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 95 AAVEKQ-DAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
A +EK + APE V T SP++ + K T+V +S
Sbjct: 309 APLEKPVNLAPEVVEPTNAAASPLQLNAPKLTDVDDS 345
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 143 EVKESPIKKSPTKK 184
E +ESP+K PTKK
Sbjct: 892 ETRESPMKNKPTKK 905
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 23.0 bits (47), Expect = 5.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 104 EKQDAAPEEVTSTEVKESPIKKSPTKKTE 190
EK DA+ T+T + +S K+PTKK++
Sbjct: 1104 EKADAS----TTTVLSDSRFMKAPTKKSQ 1128
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 22.6 bits (46), Expect = 7.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
A + QD+ + + ESP K+PT K E+
Sbjct: 348 ALLMNQDSNSVQPQALAAAESPTTKAPTTKAPTSEA 383
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 22.6 bits (46), Expect = 7.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 121 CGVLLFNCCVCHYYY 77
CG +LFN +YYY
Sbjct: 965 CGFVLFNFSQPYYYY 979
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 22.6 bits (46), Expect = 7.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 201 LSGTSVFLVGDFLIGDSLTSVEVTSSGAASCF 106
+SGT VF G F G S +V +TS F
Sbjct: 385 VSGTCVFENGAFQNGGSGCTVGITSGSGVFVF 416
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 22.2 bits (45), Expect = 9.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 114 TPHPKR*LPRKSRNLQLRNL 173
+PHP P+ +RN+++R L
Sbjct: 339 SPHPASYRPQPTRNVEVRPL 358
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 22.2 bits (45), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 148 DFRGSHLFGCGVLLFNCCVCHYY 80
+ RG + GCG L+ C +YY
Sbjct: 1419 NIRGVFVSGCGHLMHLGCFKNYY 1441
>SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3
Rfp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 254
Score = 22.2 bits (45), Expect = 9.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 123 PKR*LPRKSRNLQLRNLPPKKLKYL 197
P+R + RN + RN P L YL
Sbjct: 53 PRRRRMNRRRNERSRNFPSNHLSYL 77
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 22.2 bits (45), Expect = 9.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 108 SKTPHPKR*LPRKSRNLQLRNLP 176
SKTP + LP+ S N R +P
Sbjct: 246 SKTPSLEANLPQNSSNCSARRVP 268
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 22.2 bits (45), Expect = 9.7
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +2
Query: 116 AAPEEVTSTEVKESPIKKSPTKKTEVP 196
A+P V + S + + P K E+P
Sbjct: 512 ASPPPVPRLSITRSQVSREPEKPEEIP 538
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 22.2 bits (45), Expect = 9.7
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 98 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTE 190
A + + +APEE+ ++ K + KKS K+++
Sbjct: 201 ATKVEKSAPEELFASLKKSASQKKSAAKESK 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,721
Number of Sequences: 5004
Number of extensions: 9580
Number of successful extensions: 43
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 2,362,478
effective HSP length: 46
effective length of database: 2,132,294
effective search space used: 42645880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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