Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N11
(202 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 34 0.012
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 34 0.012
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 34 0.012
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 34 0.012
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 0.60
Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical pr... 28 0.79
Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical pr... 28 0.79
Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical pr... 28 0.79
U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific ... 28 1.0
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 27 2.4
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek (dictyos... 25 5.6
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 25 5.6
Z92803-9|CAC35822.1| 248|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 25 7.4
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 25 7.4
AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 l... 25 7.4
Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical pr... 25 9.8
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 25 9.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 25 9.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 25 9.8
AF125956-8|AAD14728.2| 678|Caenorhabditis elegans Hypothetical ... 25 9.8
AF125956-7|AAX55694.1| 657|Caenorhabditis elegans Hypothetical ... 25 9.8
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 25 9.8
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 25 9.8
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 25 9.8
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 25 9.8
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 25 9.8
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 34.3 bits (75), Expect = 0.012
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 104 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
EK ++P + T EVKE KSPTKK + PE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
A+ K++ +PE+ EVK SP +KSP K E P+S
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKS 1736
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPES 202
K+D +PE+ + E+K SP+K KSP K E P S
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPAS 1576
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
A+ K++ +PE+ S K KSPTKK + PE
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 86 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
M + E + + +E T +V E P KSPTKK + PE
Sbjct: 1515 MTHESEESRTSVKKEKTPEKVDEKP--KSPTKKDKSPE 1550
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
K++ +PE+ E+K SP +KSP K + P+S
Sbjct: 1603 KKEKSPEKSVVEELK-SPKEKSPEKADDKPKS 1633
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPES 202
VE++ A+P + T K + + KSPTKK + P S
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSS 1835
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIKKSPTKKTE 190
K++ +PE+V + + SPTKKT+
Sbjct: 1654 KKEKSPEKVEEKPTSPTKKESSPTKKTD 1681
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPES 202
VE++ +P + S+ K++ + KSPTKK + P++
Sbjct: 1662 VEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQT 1696
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 92 DAAVEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPE 199
+ + E++ +P + S+ VK + + KSPTKK + PE
Sbjct: 1763 EKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPE 1799
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 34.3 bits (75), Expect = 0.012
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 104 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
EK ++P + T EVKE KSPTKK + PE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
A+ K++ +PE+ EVK SP +KSP K E P+S
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKS 1736
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPES 202
K+D +PE+ + E+K SP+K KSP K E P S
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPAS 1576
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
A+ K++ +PE+ S K KSPTKK + PE
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 86 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
M + E + + +E T +V E P KSPTKK + PE
Sbjct: 1515 MTHESEESRTSVKKEKTPEKVDEKP--KSPTKKDKSPE 1550
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
K++ +PE+ E+K SP +KSP K + P+S
Sbjct: 1603 KKEKSPEKSVVEELK-SPKEKSPEKADDKPKS 1633
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPES 202
VE++ A+P + T K + + KSPTKK + P S
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSS 1835
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIKKSPTKKTE 190
K++ +PE+V + + SPTKKT+
Sbjct: 1654 KKEKSPEKVEEKPTSPTKKESSPTKKTD 1681
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPES 202
VE++ +P + S+ K++ + KSPTKK + P++
Sbjct: 1662 VEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQT 1696
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 92 DAAVEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPE 199
+ + E++ +P + S+ VK + + KSPTKK + PE
Sbjct: 1763 EKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPE 1799
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 34.3 bits (75), Expect = 0.012
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 104 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
EK ++P + T EVKE KSPTKK + PE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
A+ K++ +PE+ EVK SP +KSP K E P+S
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKS 1736
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPES 202
K+D +PE+ + E+K SP+K KSP K E P S
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPAS 1576
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
A+ K++ +PE+ S K KSPTKK + PE
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 86 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
M + E + + +E T +V E P KSPTKK + PE
Sbjct: 1515 MTHESEESRTSVKKEKTPEKVDEKP--KSPTKKDKSPE 1550
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
K++ +PE+ E+K SP +KSP K + P+S
Sbjct: 1603 KKEKSPEKSVVEELK-SPKEKSPEKADDKPKS 1633
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPES 202
VE++ A+P + T K + + KSPTKK + P S
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSS 1835
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIKKSPTKKTE 190
K++ +PE+V + + SPTKKT+
Sbjct: 1654 KKEKSPEKVEEKPTSPTKKESSPTKKTD 1681
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPES 202
VE++ +P + S+ K++ + KSPTKK + P++
Sbjct: 1662 VEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQT 1696
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 92 DAAVEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPE 199
+ + E++ +P + S+ VK + + KSPTKK + PE
Sbjct: 1763 EKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPE 1799
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 34.3 bits (75), Expect = 0.012
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 104 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
EK ++P + T EVKE KSPTKK + PE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
A+ K++ +PE+ EVK SP +KSP K E P+S
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKS 1736
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPES 202
K+D +PE+ + E+K SP+K KSP K E P S
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPAS 1576
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
A+ K++ +PE+ S K KSPTKK + PE
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 86 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 199
M + E + + +E T +V E P KSPTKK + PE
Sbjct: 1515 MTHESEESRTSVKKEKTPEKVDEKP--KSPTKKDKSPE 1550
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPES 202
K++ +PE+ E+K SP +KSP K + P+S
Sbjct: 1603 KKEKSPEKSVVEELK-SPKEKSPEKADDKPKS 1633
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPES 202
VE++ A+P + T K + + KSPTKK + P S
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSS 1835
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 107 KQDAAPEEVTSTEVKESPIKKSPTKKTE 190
K++ +PE+V + + SPTKKT+
Sbjct: 1654 KKEKSPEKVEEKPTSPTKKESSPTKKTD 1681
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPES 202
VE++ +P + S+ K++ + KSPTKK + P++
Sbjct: 1662 VEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQT 1696
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 92 DAAVEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPE 199
+ + E++ +P + S+ VK + + KSPTKK + PE
Sbjct: 1763 EKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPE 1799
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 28.7 bits (61), Expect = 0.60
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKK 184
A VE ++ + E EV+ESPIKK T +
Sbjct: 459 AKVESEEPSDNEEEEEEVEESPIKKDKTPR 488
>Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 28.3 bits (60), Expect = 0.79
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 104 EKQDAAPEEVTSTEVKESPIKKSPTKKT 187
E+ D +EVT T + E P+KK+ ++T
Sbjct: 40 EEVDVVMDEVTETIISEEPVKKNKHQRT 67
>Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 28.3 bits (60), Expect = 0.79
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 104 EKQDAAPEEVTSTEVKESPIKKSPTKKT 187
E+ D +EVT T + E P+KK+ ++T
Sbjct: 40 EEVDVVMDEVTETIISEEPVKKNKHQRT 67
>Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 28.3 bits (60), Expect = 0.79
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 104 EKQDAAPEEVTSTEVKESPIKKSPTKKT 187
E+ D +EVT T + E P+KK+ ++T
Sbjct: 40 EEVDVVMDEVTETIISEEPVKKNKHQRT 67
>U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific
transcript protein20 protein.
Length = 231
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 86 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTE 190
M+D K AA + +S+ +K IKKSPT+K+E
Sbjct: 156 MSDIEKSKSRAASKSNSSSSIKS--IKKSPTEKSE 188
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 89 ADAAVEKQDAAPEEVTSTEVKESPIKKSPTK 181
A+ EK++ P+EVT + KE +K+ TK
Sbjct: 96 AEKEEEKEEKPPKEVTEEKEKEKEREKTKTK 126
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform c protein.
Length = 536
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 92 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKK 184
D E + P E T+ +VK+ K+SP KK
Sbjct: 112 DPETETKKKDPSEQTNGQVKKKSDKQSPKKK 142
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 92 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKK 184
D E + P E T+ +VK+ K+SP KK
Sbjct: 112 DPETETKKKDPSEQTNGQVKKKSDKQSPKKK 142
>Z92803-9|CAC35822.1| 248|Caenorhabditis elegans Hypothetical
protein K01G5.10 protein.
Length = 248
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 148 DFRGSHLFGCGVLLFNCCVCH 86
DF G+ FGC LLF+ H
Sbjct: 211 DFHGAKNFGCRALLFDSSSSH 231
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Frame = +2
Query: 86 MADAAVEKQDAA----PEEVTSTEVKESPIKKSP 175
+A A EK++A+ E+ STEV+E+P KK P
Sbjct: 349 IAAAKREKKEASNPFDDEDDESTEVEEAPKKKDP 382
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTEVKESPIKKSPTKK 184
+EK+DA+P + TST SP P K
Sbjct: 465 IEKKDASPPKTTSTS-SASPPNPDPAMK 491
>AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 like
protein 6 protein.
Length = 190
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 95 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKT 187
AA K+ + T +VK++ +KK+ KKT
Sbjct: 113 AATAKKPTVKKAATGEKVKKTVVKKTVAKKT 143
>Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical
protein F53H2.3 protein.
Length = 667
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 159 GDSLTSVEVTSSGAASCFSTAASA 88
G ++ S +TSSGA SC + SA
Sbjct: 250 GTAIISTALTSSGAPSCATPGISA 273
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 102 LKSKTPHPKR*LPRKSRNLQLRNLPPKKL 188
+ KT PKR +PR +N N+ K+L
Sbjct: 88 IDGKTVDPKRAVPRDDKNRSESNVSTKRL 116
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPES 202
+EK + + +E S E V E P KK KKTE +S
Sbjct: 13396 LEKDEKSTKESESKETVDEKPKKKVLKKKTEKSDS 13430
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 101 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPES 202
+EK + + +E S E V E P KK KKTE +S
Sbjct: 13396 LEKDEKSTKESESKETVDEKPKKKVLKKKTEKSDS 13430
>AF125956-8|AAD14728.2| 678|Caenorhabditis elegans Hypothetical
protein DC2.7a protein.
Length = 678
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 168 FLIGDSLTSVEVTSSGAASCFSTAASA 88
F GD T VE+TS+ + SC S A S+
Sbjct: 622 FQFGDEET-VEITSASSTSCNSEAKSS 647
>AF125956-7|AAX55694.1| 657|Caenorhabditis elegans Hypothetical
protein DC2.7c protein.
Length = 657
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 168 FLIGDSLTSVEVTSSGAASCFSTAASA 88
F GD T VE+TS+ + SC S A S+
Sbjct: 592 FQFGDEET-VEITSASSTSCNSEAKSS 617
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 102 LKSKTPHPKR*LPRKSRNLQLRNLPPKKL 188
+ KT PKR +PR +N N+ K+L
Sbjct: 50 IDGKTVDPKRAVPRDDKNRSESNVSTKRL 78
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 102 LKSKTPHPKR*LPRKSRNLQLRNLPPKKL 188
+ KT PKR +PR +N N+ K+L
Sbjct: 50 IDGKTVDPKRAVPRDDKNRSESNVSTKRL 78
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 102 LKSKTPHPKR*LPRKSRNLQLRNLPPKKL 188
+ KT PKR +PR +N N+ K+L
Sbjct: 88 IDGKTVDPKRAVPRDDKNRSESNVSTKRL 116
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 102 LKSKTPHPKR*LPRKSRNLQLRNLPPKKL 188
+ KT PKR +PR +N N+ K+L
Sbjct: 88 IDGKTVDPKRAVPRDDKNRSESNVSTKRL 116
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = +2
Query: 119 APEEVTSTEVKESPIKKSPT----KKTEVPES 202
APEE S EV + KK P +K EVPE+
Sbjct: 132 APEEKKSEEVVAAEEKKEPAAVVEEKKEVPET 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,942,765
Number of Sequences: 27780
Number of extensions: 56506
Number of successful extensions: 338
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 46
effective length of database: 11,462,318
effective search space used: 229246360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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