Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N11
         (202 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   0.35 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   1.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   3.2  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    19   5.6  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    19   5.6  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              19   7.4  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              18   9.8  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 0.35
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = -1

Query: 196 RYFSFFGGRFLNWR---FLDFRGSHLFGCGV 113
           +Y   F G FLN     F+DF   +L  CGV
Sbjct: 118 KYQEIFNGYFLNSESKDFIDFIQKNLQCCGV 148


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 159 GDSLTSVEVTSSGAASCFSTAASAIIIIE 73
           G S  + E TS+  A  F+TAAS+  ++E
Sbjct: 894 GCSSKNGEPTSAAFAQGFATAASSPGLLE 922


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -2

Query: 189 SVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAII 82
           +  L  DF+    LT +        SC  +A S II
Sbjct: 95  AAILANDFMKNLELTQIRRDRGLHVSCSFSAGSTII 130


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 62  KIRNKELKLQHVLRTT 15
           K++NK+   +H+L+ T
Sbjct: 328 KVKNKKAGSKHLLQNT 343


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 104 EKQDAAPEEVTSTEVK 151
           EKQ     E +STE+K
Sbjct: 99  EKQTTIEREFSSTEMK 114


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 115 VLLFNCCVC 89
           VL+F  CVC
Sbjct: 5   VLIFGFCVC 13


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 73  VSKRKLEIKN*NYSTCYAQRKTL 5
           +S   + +K+     C+A+ KTL
Sbjct: 107 ISDADIHLKSSKLIKCFAKYKTL 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,344
Number of Sequences: 438
Number of extensions: 671
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2659293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)