Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N07
         (187 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   0.42 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    22   3.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            20   9.1  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    20   9.1  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    20   9.1  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 162 RLEDLHQLQRPYAFHRRYGACAHPPLQ 82
           R+E + +L    AF R +GA + PP +
Sbjct: 846 RIESIQRLFTRVAFRRLFGAASLPPYE 872


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 111 YGACAHPPLQITSDIPLP 58
           Y    HPP++ T  +P P
Sbjct: 420 YWRATHPPVRPTPSVPRP 437


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 93  PPLQITSDIPL 61
           PPL+  SD+PL
Sbjct: 702 PPLEDDSDVPL 712


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 102 KLRIFYEKRMGAEVDADLLGD 164
           KL++  + ++ A VDAD  GD
Sbjct: 775 KLKLGEDGQLEAYVDADWAGD 795


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 45  NVSYPATGCQKLFEVVDE 98
           NVS   +G +KL EVV +
Sbjct: 637 NVSIGRSGSRKLIEVVPD 654


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,588
Number of Sequences: 2352
Number of extensions: 2532
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 40
effective length of database: 469,899
effective search space used:  9867879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)