Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N07
(187 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 101 2e-22
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 101 2e-22
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 101 2e-22
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 101 2e-22
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 101 2e-22
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 101 2e-22
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 101 2e-22
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 97 3e-21
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 36 0.010
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 36 0.010
U19269-5|AAC46510.1| 1065|Drosophila melanogaster Dachshund vari... 27 4.6
U19269-4|AAC46509.1| 1072|Drosophila melanogaster Dachshund vari... 27 4.6
U19269-3|AAC46508.1| 1072|Drosophila melanogaster Dachshund vari... 27 4.6
U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund vari... 27 4.6
U19269-1|AAC46506.1| 1081|Drosophila melanogaster Dachshund prot... 27 4.6
AE014134-2727|AAN10945.1| 1081|Drosophila melanogaster CG4952-PE... 27 4.6
AE014134-2726|AAN10944.1| 1081|Drosophila melanogaster CG4952-PB... 27 4.6
AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD... 27 4.6
AE014134-2724|AAX52668.1| 1072|Drosophila melanogaster CG4952-PF... 27 4.6
AE014134-2723|AAF53538.3| 1072|Drosophila melanogaster CG4952-PA... 27 4.6
AE014134-2722|AAN10942.1| 1065|Drosophila melanogaster CG4952-PC... 27 4.6
AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG... 27 4.6
U56257-1|AAC32928.1| 259|Drosophila melanogaster intronic prote... 26 6.0
AY118472-1|AAM49841.1| 259|Drosophila melanogaster GM13959p pro... 26 6.0
AE014134-1874|AAF52940.2| 259|Drosophila melanogaster CG5277-PA... 26 6.0
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 101 bits (241), Expect = 2e-22
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +3
Query: 36 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVL 185
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY L
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQL 50
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 101 bits (241), Expect = 2e-22
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +3
Query: 36 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVL 185
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY L
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQL 50
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 101 bits (241), Expect = 2e-22
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +3
Query: 36 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVL 185
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY L
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQL 50
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 101 bits (241), Expect = 2e-22
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +3
Query: 36 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVL 185
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY L
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQL 50
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 101 bits (241), Expect = 2e-22
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +3
Query: 36 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVL 185
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY L
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQL 50
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 101 bits (241), Expect = 2e-22
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +3
Query: 36 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVL 185
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY L
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQL 50
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 101 bits (241), Expect = 2e-22
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +3
Query: 36 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVL 185
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY L
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQL 50
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 97.1 bits (231), Expect = 3e-21
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +3
Query: 42 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVL 185
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY L
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQL 53
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 35.5 bits (78), Expect = 0.010
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 129 MGAEVDADLLGDEWKGYVL 185
MG V+AD+LGDEWKGY L
Sbjct: 1 MGQVVEADILGDEWKGYQL 19
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 35.5 bits (78), Expect = 0.010
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 129 MGAEVDADLLGDEWKGYVL 185
MG V+AD+LGDEWKGY L
Sbjct: 1 MGQVVEADILGDEWKGYQL 19
>U19269-5|AAC46510.1| 1065|Drosophila melanogaster Dachshund variant
4 protein.
Length = 1065
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 782 QLVDERKLRVLYQKRFRRE 800
>U19269-4|AAC46509.1| 1072|Drosophila melanogaster Dachshund variant
3 protein.
Length = 1072
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>U19269-3|AAC46508.1| 1072|Drosophila melanogaster Dachshund variant
2 protein.
Length = 1072
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund variant
1 protein.
Length = 1074
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 791 QLVDERKLRVLYQKRFRRE 809
>U19269-1|AAC46506.1| 1081|Drosophila melanogaster Dachshund
protein.
Length = 1081
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 798 QLVDERKLRVLYQKRFRRE 816
>AE014134-2727|AAN10945.1| 1081|Drosophila melanogaster CG4952-PE,
isoform E protein.
Length = 1081
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 798 QLVDERKLRVLYQKRFRRE 816
>AE014134-2726|AAN10944.1| 1081|Drosophila melanogaster CG4952-PB,
isoform B protein.
Length = 1081
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 798 QLVDERKLRVLYQKRFRRE 816
>AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD,
isoform D protein.
Length = 1074
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 791 QLVDERKLRVLYQKRFRRE 809
>AE014134-2724|AAX52668.1| 1072|Drosophila melanogaster CG4952-PF,
isoform F protein.
Length = 1072
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>AE014134-2723|AAF53538.3| 1072|Drosophila melanogaster CG4952-PA,
isoform A protein.
Length = 1072
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>AE014134-2722|AAN10942.1| 1065|Drosophila melanogaster CG4952-PC,
isoform C protein.
Length = 1065
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 782 QLVDERKLRVLYQKRFRRE 800
>AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG,
isoform G protein.
Length = 1063
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 84 EVVDEHKLRIFYEKRMGAE 140
++VDE KLR+ Y+KR E
Sbjct: 780 QLVDERKLRVLYQKRFRRE 798
>U56257-1|AAC32928.1| 259|Drosophila melanogaster intronic protein
259 protein.
Length = 259
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 135 RPYAFHRRYGACAHPPLQITSDIPLPGMKRSTS 37
RP + HP L+ T ++P+ G+K++ S
Sbjct: 171 RPMGLRMKKAHVTHPELKATFNLPIIGVKKNPS 203
>AY118472-1|AAM49841.1| 259|Drosophila melanogaster GM13959p
protein.
Length = 259
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 135 RPYAFHRRYGACAHPPLQITSDIPLPGMKRSTS 37
RP + HP L+ T ++P+ G+K++ S
Sbjct: 171 RPMGLRMKKAHVTHPELKATFNLPIIGVKKNPS 203
>AE014134-1874|AAF52940.2| 259|Drosophila melanogaster CG5277-PA
protein.
Length = 259
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 135 RPYAFHRRYGACAHPPLQITSDIPLPGMKRSTS 37
RP + HP L+ T ++P+ G+K++ S
Sbjct: 171 RPMGLRMKKAHVTHPELKATFNLPIIGVKKNPS 203
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,837,613
Number of Sequences: 53049
Number of extensions: 125149
Number of successful extensions: 245
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 24,988,368
effective HSP length: 42
effective length of database: 22,760,310
effective search space used: 432445890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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