Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N07
         (187 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   1.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   2.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    19   4.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    19   5.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   7.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    18   9.5  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    18   9.5  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 7/22 (31%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 8   VTFEGTDRS-HEVERFIPGNGM 70
           +  EG  ++ + +E ++PGNG+
Sbjct: 404 IDLEGAPQNFYYIEEYLPGNGV 425


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 126 RMGAEVDADLLGDEWKGYV 182
           R+G  + +D L +  +GYV
Sbjct: 227 RIGLRIQSDSLAENVEGYV 245


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +3

Query: 69  CQKLFEVVDEHKLRIFYEKRMGA--EVDADLL 158
           CQ  F+        +  EKR G   EVD DL+
Sbjct: 43  CQNWFDKFRSGDFSLKDEKRSGRPVEVDDDLI 74


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +3

Query: 36  MKLNVSYPAT 65
           +K++VSYP+T
Sbjct: 339 IKISVSYPST 348


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 85  SNNF*HPVAGYETFN 41
           +NN  +P   Y TFN
Sbjct: 222 TNNLFYPYPPYGTFN 236


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 21  GLIAVMKLNVSY 56
           GLI ++ LN+SY
Sbjct: 333 GLIRLIVLNLSY 344


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
          protein.
          Length = 149

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 47 VQLHDCDQSL 18
          VQLH C Q++
Sbjct: 48 VQLHSCFQTM 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,028
Number of Sequences: 438
Number of extensions: 745
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 41
effective length of database: 128,385
effective search space used:  2567700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)