Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N06
(304 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0109 - 22454539-22456268,22457069-22457279 122 4e-29
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 122 4e-29
03_02_0546 - 9381989-9383733,9385838-9386054 121 1e-28
03_02_0540 + 9340379-9340592,9341250-9342988 120 2e-28
11_08_0075 + 28173220-28173433,28175348-28177083 120 3e-28
03_06_0484 + 34233042-34233258,34235317-34237049 120 3e-28
05_04_0392 - 20889699-20891726 98 1e-21
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 96 5e-21
05_04_0052 - 17515344-17517353 94 2e-20
08_01_0654 - 5639419-5641449 93 5e-20
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 89 8e-19
03_02_0542 - 9348126-9349585,9352433-9352655 84 2e-17
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 81 2e-16
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 79 5e-16
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 76 5e-15
11_01_0564 - 4447078-4448519,4449465-4449711 66 5e-12
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 60 3e-10
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 58 2e-09
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 57 3e-09
03_02_0180 - 6211823-6213559 55 9e-09
04_03_0175 + 12269091-12269561 29 0.70
07_03_0667 + 20517700-20517981 27 2.1
04_03_0815 - 19949584-19950111,19950210-19950632 27 2.8
10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735... 27 3.7
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 27 3.7
03_02_0187 - 6248226-6249226,6249296-6250148 27 3.7
01_05_0057 + 17705023-17705143,17706186-17706538,17708002-177080... 25 8.6
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 122 bits (295), Expect = 4e-29
Identities = 61/98 (62%), Positives = 68/98 (69%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQAAIL G+ +E+VQD G+ETAGGVMT LI RN Y
Sbjct: 377 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTY 436
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
SDNQPGVLIQV+EGERA TKDN+LLGKFEL+GIPP PR
Sbjct: 437 SDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPR 474
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 122 bits (295), Expect = 4e-29
Identities = 61/98 (62%), Positives = 68/98 (69%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQAAIL G+ +E+VQD G+ETAGGVMT LI RN Y
Sbjct: 570 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTY 629
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
SDNQPGVLIQV+EGERA TKDN+LLGKFEL+GIPP PR
Sbjct: 630 SDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPR 667
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 121 bits (291), Expect = 1e-28
Identities = 60/98 (61%), Positives = 66/98 (67%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQAAIL G+ ++ VQD G+ETAGGVMT LI RN Y
Sbjct: 379 GAAVQAAILSGEGNQRVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTY 438
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
SDNQPGVLIQV+EGER TKDN+LLGKFELTGIPP PR
Sbjct: 439 SDNQPGVLIQVYEGERTRTKDNNLLGKFELTGIPPAPR 476
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 120 bits (290), Expect = 2e-28
Identities = 60/98 (61%), Positives = 67/98 (68%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQAAIL G+ +E+VQD G+ETAGGVMT LI RN Y
Sbjct: 378 GAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLIPRNTTIPTKKEQVFSTY 437
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
SDNQPGVLIQV+EGER TKDN+LLGKFEL+GIPP PR
Sbjct: 438 SDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPR 475
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 120 bits (288), Expect = 3e-28
Identities = 59/98 (60%), Positives = 67/98 (68%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQAAIL G+ +E+VQD G+ETAGGVMT LI RN Y
Sbjct: 378 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTY 437
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
SDNQPGVLIQV+EGER T+DN+LLGKFEL+GIPP PR
Sbjct: 438 SDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPR 475
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 120 bits (288), Expect = 3e-28
Identities = 59/98 (60%), Positives = 67/98 (68%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQAAIL G+ +E+VQD G+ETAGGVMT LI RN Y
Sbjct: 379 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTY 438
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
SDNQPGVLIQV+EGER T+DN+LLGKFEL+GIPP PR
Sbjct: 439 SDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPR 476
>05_04_0392 - 20889699-20891726
Length = 675
Score = 97.9 bits (233), Expect = 1e-21
Identities = 50/98 (51%), Positives = 57/98 (58%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQA+I+ G E + G+ETAGGVMT LI RN Y
Sbjct: 413 GAAVQASIISGHVDENTESMILLDVAPLTLGLETAGGVMTKLIPRNTVVPTKKTQVFTTY 472
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
D Q V IQVFEGER+MT+DN LLGKF+LTGI P PR
Sbjct: 473 KDRQTTVTIQVFEGERSMTRDNRLLGKFDLTGIAPAPR 510
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 95.9 bits (228), Expect = 5e-21
Identities = 50/98 (51%), Positives = 57/98 (58%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQ +IL G+ +E +D GIET GGVMT LI RN Y
Sbjct: 401 GAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTY 460
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
D Q V IQVFEGER+MTKD LLGKF+L+GIP PR
Sbjct: 461 QDQQTTVSIQVFEGERSMTKDCRLLGKFDLSGIPAAPR 498
>05_04_0052 - 17515344-17517353
Length = 669
Score = 93.9 bits (223), Expect = 2e-20
Identities = 46/98 (46%), Positives = 57/98 (58%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAA+QA I+ GD + +D G+ETAGGVM TLI RN Y
Sbjct: 409 GAAIQANIVGGDTDNKTRDMVVLDVTPLTLGLETAGGVMATLIPRNTPVPTKRAQLFSTY 468
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
D Q V ++VFEGER+MT+DN LLG+F+L GI P PR
Sbjct: 469 KDKQTTVTVKVFEGERSMTRDNRLLGRFDLAGIAPAPR 506
>08_01_0654 - 5639419-5641449
Length = 676
Score = 92.7 bits (220), Expect = 5e-20
Identities = 47/98 (47%), Positives = 55/98 (56%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQA+I+ G E + G+ETAGGVM LI RN Y
Sbjct: 413 GAAVQASIISGHVDENTESMILLDVAPLTLGLETAGGVMAKLIPRNTVVPTKKTQVFTTY 472
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
D Q V IQVFEGER+MT+DN LLG+F+L GI P PR
Sbjct: 473 KDKQTTVTIQVFEGERSMTRDNRLLGRFDLAGIAPAPR 510
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 88.6 bits (210), Expect = 8e-19
Identities = 46/98 (46%), Positives = 57/98 (58%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQ +I+ G+ E +D GIETAGGVMT LI RN Y
Sbjct: 407 GAAVQGSIISGEGGAETKDILLLDVTPLTLGIETAGGVMTKLIPRNTRIPVKKSQVFTTY 466
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
D+Q V I+VFEGER++TKD LG+F+L+GI P PR
Sbjct: 467 EDHQTTVSIKVFEGERSLTKDCRELGRFDLSGIAPAPR 504
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 83.8 bits (198), Expect = 2e-17
Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +1
Query: 10 GAAVQAAILHGDKSE-EVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXX 186
GAAV+AA+L+GD +E +++D GIE GG M+ LI RN
Sbjct: 389 GAAVKAALLNGDANEKDLRDVVLLDVTPLSLGIEVFGGGMSVLIPRNTTIPVSRQKMYTT 448
Query: 187 YSDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
+ DN+ VLI V EGE TKDN+ LGKF LTGIPP PR
Sbjct: 449 HYDNETAVLINVNEGEGRRTKDNNPLGKFVLTGIPPAPR 487
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 81.0 bits (191), Expect = 2e-16
Identities = 44/98 (44%), Positives = 52/98 (53%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAA+Q IL GD V+D GIET GG+ T LI RN
Sbjct: 399 GAAIQGGILRGD----VKDLLLLDVTPLSLGIETLGGIFTRLINRNTTVPTKKSQVFSTA 454
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
+DNQ V I+V +GER M DN LLG+F+L GIPP PR
Sbjct: 455 ADNQTQVGIKVLQGEREMAADNKLLGEFDLVGIPPAPR 492
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 79.4 bits (187), Expect = 5e-16
Identities = 43/98 (43%), Positives = 52/98 (53%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAA+Q IL GD V++ GIET GG+ T LI RN
Sbjct: 419 GAAIQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTA 474
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
+DNQ V I+V +GER M DN LLG+F+L GIPP PR
Sbjct: 475 ADNQTQVGIRVLQGEREMATDNKLLGEFDLVGIPPAPR 512
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 76.2 bits (179), Expect = 5e-15
Identities = 42/98 (42%), Positives = 48/98 (48%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 189
GAAVQA +L GD V D G+ET GGVMT +I RN
Sbjct: 351 GAAVQAGVLSGD----VSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTA 406
Query: 190 SDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
+D Q V I V +GER +DN LG F L GIPP PR
Sbjct: 407 ADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPR 444
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 66.1 bits (154), Expect = 5e-12
Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEE-VQDXXXXXXXXXXXGIETAGG-VMTTLIKRNXXXXXXXXXXXX 183
GAA+QA+IL G ++ + D G+ET M+ +I RN
Sbjct: 396 GAAIQASILCGGTDDKRLVDMLLREVTPLSLGVETEDNCTMSVVIPRNTAIPTKKVKNFT 455
Query: 184 XYSDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
DNQ V V+EGE A TKDN+LLG+F L GIPP P+
Sbjct: 456 TLYDNQINVSFPVYEGESANTKDNNLLGEFTLYGIPPAPK 495
>11_01_0563 +
4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 60.1 bits (139), Expect = 3e-10
Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +1
Query: 10 GAAVQAAILHGDKSE---EVQDXXXXXXXXXXXGIETA-GGVMTTLIKRNXXXXXXXXXX 177
GAA+QA++L+GD E + Q GIE M+ +I RN
Sbjct: 402 GAAIQASVLNGDADEADDKKQVMILRDITPLSLGIEVGLDHTMSVVIPRNTFIPTKNVRR 461
Query: 178 XXXYSDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
DNQ V I VFEGE A N+LLGKF L+GI P PR
Sbjct: 462 YSTIFDNQIAVSINVFEGESASILRNNLLGKFVLSGILPAPR 503
Score = 56.8 bits (131), Expect = 3e-09
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Frame = +1
Query: 10 GAAVQAAILHGDKSE---EVQDXXXXXXXXXXXGIETAGG---VMTTLIKRNXXXXXXXX 171
GAA+QA+IL+GD + + + G+E M+ +I RN
Sbjct: 1034 GAAIQASILNGDADDADDKKKAMILRDITPFSLGVEIYDENDHTMSVVIPRNTFIPAKNT 1093
Query: 172 XXXXXYSDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEP 300
+ D Q V I+VFEGE A TK+N LLG+F L+GI P P
Sbjct: 1094 QRYTTHRDMQTSVSIKVFEGESASTKNNYLLGEFVLSGITPAP 1136
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 57.6 bits (133), Expect = 2e-09
Identities = 40/106 (37%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Frame = +1
Query: 10 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAG-GV-------MTTLIKRNXXXXXX 165
GAA+QA+IL+GD D I GV M+ +I RN
Sbjct: 343 GAAIQASILNGDSDNADADADDKKRVMILRDITPLSLGVEINFDHTMSVVIPRNTFIPTK 402
Query: 166 XXXXXXXYSDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIPPEPR 303
DNQ V VFEGE A T DN+LLGKF L+G+ P PR
Sbjct: 403 NTRRYTTLYDNQIRVSFPVFEGESASTLDNNLLGKFVLSGVLPAPR 448
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 56.8 bits (131), Expect = 3e-09
Identities = 28/64 (43%), Positives = 33/64 (51%)
Frame = +1
Query: 103 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNDLLGKFELT 282
IETAGG +T +I R Y Q V I VF+GE + KDN L G+ LT
Sbjct: 432 IETAGGAVTPMIPRRSRLPAERTHVFTTYLGRQTAVAINVFQGEGSTAKDNTLFGRLVLT 491
Query: 283 GIPP 294
GIPP
Sbjct: 492 GIPP 495
>03_02_0180 - 6211823-6213559
Length = 578
Score = 55.2 bits (127), Expect = 9e-09
Identities = 36/99 (36%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ARGGAAVQAAILHG--DKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXX 174
A GAA++ AI G D S + D GI GG +I RN
Sbjct: 405 AVSGAALEGAIASGVSDPSGSL-DLLTIQATPMNLGIRADGGNFAAIIPRNTAVPARRDM 463
Query: 175 XXXXYSDNQPGVLIQVFEGERAMTKDNDLLGKFELTGIP 291
DNQ LI V+EGE +DN LLG F++TGIP
Sbjct: 464 LFTTTHDNQTEALIAVYEGEGNQAEDNHLLGYFKITGIP 502
>04_03_0175 + 12269091-12269561
Length = 156
Score = 29.1 bits (62), Expect = 0.70
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +3
Query: 12 SRRTGCNSARRQV*GGARSSAARRDPVVARYRDRG 116
S TG SAR GG SSAAR DP+ DRG
Sbjct: 78 SSLTGGCSARGGEGGGVESSAARGDPLGVVNSDRG 112
>07_03_0667 + 20517700-20517981
Length = 93
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 295 RVGYRSVRTCRGGRYPWSWRAHPRTL 218
R G R + TCR G+ W A PR L
Sbjct: 43 RGGERELCTCRNGKRRWERGARPRAL 68
>04_03_0815 - 19949584-19950111,19950210-19950632
Length = 316
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 100 RATTGSRRAAEDLAPPQTCRRAELQ 26
RATTG RAAE CR AEL+
Sbjct: 166 RATTGRVRAAEAELERARCRNAELE 190
>10_08_0789 +
20569738-20570207,20573425-20573464,20573484-20573536,
20573633-20574212,20574323-20575384,20575631-20575813,
20576112-20576199,20576285-20576532,20576712-20577053,
20579026-20579163,20579521-20579547
Length = 1076
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 RSRRTGCNSARRQV*GGARSSAARR 83
RSRR+ C+ A R GARS RR
Sbjct: 74 RSRRSSCSRAARTPPSGARSPRRRR 98
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 281 VSSNLPRRSLSLVMARSPSNTWMSTPGWLSE 189
+SS++P S+S S WM+ P W ++
Sbjct: 352 LSSSVPFTSMSTACGASTFEVWMTLPKWAAQ 382
>03_02_0187 - 6248226-6249226,6249296-6250148
Length = 617
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 141 LDERSHNTSRGLDTERQRGHVEQQKILHLLRLVAVQNCSLY 19
+ +R H T RG+ + R + ILH LR +A +++
Sbjct: 186 ISDRPHFTHRGILLDTARNFYPVRDILHTLRAMAFNKLNVF 226
>01_05_0057 +
17705023-17705143,17706186-17706538,17708002-17708044,
17708698-17709140
Length = 319
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 187 YSDNQPGVLIQVFEGERAMTKDND 258
+ +NQPG FEG + KDND
Sbjct: 68 FHNNQPGKPKVTFEGSQEEYKDND 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.135 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,581,091
Number of Sequences: 37544
Number of extensions: 133126
Number of successful extensions: 304
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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