Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N04
         (183 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      27   2.6  
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    27   2.6  
BT022542-1|AAY54958.1|  163|Drosophila melanogaster IP06517p pro...    27   4.6  
AE014297-4189|AAF56754.1|  187|Drosophila melanogaster CG12426-P...    27   4.6  

>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 166 LNFK*HLNSTIMKYNKAL 113
           L FK H+N+TIMK NK +
Sbjct: 781 LTFKYHINNTIMKVNKII 798


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 166 LNFK*HLNSTIMKYNKAL 113
           L FK H+N+TIMK NK +
Sbjct: 729 LTFKYHINNTIMKVNKII 746


>BT022542-1|AAY54958.1|  163|Drosophila melanogaster IP06517p
           protein.
          Length = 163

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 13  ICNTHCELGFKLFS*IWHINELMSFLQCTGLITLV--LCC 126
           I +THC LG +    +W    ++  + C  ++ ++  LCC
Sbjct: 30  ILSTHCVLGEEYGISVWMYTFILPAIACQSVVLVIFRLCC 69


>AE014297-4189|AAF56754.1|  187|Drosophila melanogaster CG12426-PA
           protein.
          Length = 187

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 13  ICNTHCELGFKLFS*IWHINELMSFLQCTGLITLV--LCC 126
           I +THC LG +    +W    ++  + C  ++ ++  LCC
Sbjct: 51  ILSTHCVLGEEYGISVWMYTFILPAIACQSVVLVIFRLCC 90


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,070,334
Number of Sequences: 53049
Number of extensions: 99375
Number of successful extensions: 120
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 24,988,368
effective HSP length: 41
effective length of database: 22,813,359
effective search space used: 433453821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)