Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_N03
(248 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021213-1|AAX33361.1| 177|Drosophila melanogaster RH72463p pro... 110 2e-25
Y10017-1|CAA71124.1| 166|Drosophila melanogaster ribosomal prot... 109 7e-25
Y10015-2|CAA71121.1| 166|Drosophila melanogaster ribosomal prot... 109 7e-25
Y09766-1|CAA70905.1| 166|Drosophila melanogaster ribosomal prot... 109 7e-25
AE014296-1484|AAF50393.1| 166|Drosophila melanogaster CG6253-PA... 109 7e-25
BT016128-1|AAV37013.1| 167|Drosophila melanogaster GM06787p pro... 107 3e-24
AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p pro... 28 2.0
AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA... 28 2.0
EF434174-1|ABO26294.1| 866|Drosophila melanogaster AGO3 protein. 27 3.5
EF211827-1|ABO27430.1| 867|Drosophila melanogaster Argonaute3 p... 27 3.5
BT003581-1|AAO39585.1| 946|Drosophila melanogaster LD17329p pro... 26 8.0
AJ620302-1|CAF04325.1| 287|Drosophila melanogaster THO complex ... 26 8.0
AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA... 26 8.0
AE014296-40|AAN11424.1| 287|Drosophila melanogaster CG17143-PB,... 26 8.0
>BT021213-1|AAX33361.1| 177|Drosophila melanogaster RH72463p
protein.
Length = 177
Score = 110 bits (265), Expect = 2e-25
Identities = 48/75 (64%), Positives = 61/75 (81%)
Frame = +2
Query: 23 VMPFARYVEPGRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTY 202
VMPF R+V+ GR+A S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLT
Sbjct: 11 VMPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTK 70
Query: 203 IRLKYPFTAPTRVVR 247
R+K+P+TAPTR+VR
Sbjct: 71 YRIKFPYTAPTRIVR 85
>Y10017-1|CAA71124.1| 166|Drosophila melanogaster ribosomal protein
L14 protein.
Length = 166
Score = 109 bits (261), Expect = 7e-25
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +2
Query: 26 MPFARYVEPGRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTYI 205
MPF R+V+ GR+A S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLT
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60
Query: 206 RLKYPFTAPTRVVR 247
R+K+P+TAPTR+VR
Sbjct: 61 RIKFPYTAPTRIVR 74
>Y10015-2|CAA71121.1| 166|Drosophila melanogaster ribosomal protein
L14 protein.
Length = 166
Score = 109 bits (261), Expect = 7e-25
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +2
Query: 26 MPFARYVEPGRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTYI 205
MPF R+V+ GR+A S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLT
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60
Query: 206 RLKYPFTAPTRVVR 247
R+K+P+TAPTR+VR
Sbjct: 61 RIKFPYTAPTRIVR 74
>Y09766-1|CAA70905.1| 166|Drosophila melanogaster ribosomal protein
L14 protein.
Length = 166
Score = 109 bits (261), Expect = 7e-25
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +2
Query: 26 MPFARYVEPGRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTYI 205
MPF R+V+ GR+A S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLT
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60
Query: 206 RLKYPFTAPTRVVR 247
R+K+P+TAPTR+VR
Sbjct: 61 RIKFPYTAPTRIVR 74
>AE014296-1484|AAF50393.1| 166|Drosophila melanogaster CG6253-PA
protein.
Length = 166
Score = 109 bits (261), Expect = 7e-25
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +2
Query: 26 MPFARYVEPGRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTYI 205
MPF R+V+ GR+A S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLT
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60
Query: 206 RLKYPFTAPTRVVR 247
R+K+P+TAPTR+VR
Sbjct: 61 RIKFPYTAPTRIVR 74
>BT016128-1|AAV37013.1| 167|Drosophila melanogaster GM06787p
protein.
Length = 167
Score = 107 bits (256), Expect = 3e-24
Identities = 46/73 (63%), Positives = 59/73 (80%)
Frame = +2
Query: 29 PFARYVEPGRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTYIR 208
PF R+V+ GR+A S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLT R
Sbjct: 3 PFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYR 62
Query: 209 LKYPFTAPTRVVR 247
+K+P+TAPTR+VR
Sbjct: 63 IKFPYTAPTRIVR 75
>AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p
protein.
Length = 1265
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 193 MELVEANLLPRNTTAGTVNKCACLINDIN 107
+EL+++N L N+T + KC N +N
Sbjct: 731 IELLKSNQLDENSTTDNIEKCVAFFNAMN 759
>AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA
protein.
Length = 1265
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 193 MELVEANLLPRNTTAGTVNKCACLINDIN 107
+EL+++N L N+T + KC N +N
Sbjct: 731 IELLKSNQLDENSTTDNIEKCVAFFNAMN 759
>EF434174-1|ABO26294.1| 866|Drosophila melanogaster AGO3 protein.
Length = 866
Score = 27.1 bits (57), Expect = 3.5
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = -3
Query: 195 KWSWLRRICCRETPLPGPSISAR 127
+++ +++ICC E P+P I+A+
Sbjct: 578 RYAAIKKICCSEIPIPSQVINAK 600
>EF211827-1|ABO27430.1| 867|Drosophila melanogaster Argonaute3
protein.
Length = 867
Score = 27.1 bits (57), Expect = 3.5
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = -3
Query: 195 KWSWLRRICCRETPLPGPSISAR 127
+++ +++ICC E P+P I+A+
Sbjct: 578 RYAAIKKICCSEIPIPSQVINAK 600
>BT003581-1|AAO39585.1| 946|Drosophila melanogaster LD17329p
protein.
Length = 946
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 111 STTPTNFPFRGPSETRATRPGST*RAKGMTSSQEPS 4
ST P N G + TR R S+ RA+ SQE S
Sbjct: 437 STVPLNLAPSGGNTTRQRRLRSSNRARATIESQESS 472
>AJ620302-1|CAF04325.1| 287|Drosophila melanogaster THO complex 7
protein.
Length = 287
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 92 KLVGVVDIIDQTRALIDGPGSGVSRQQIRL 181
KLV + D I + R LIDG G+G R+ + L
Sbjct: 17 KLVEMNDEIIKQRLLIDGDGTGEDRRIVVL 46
>AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA
protein.
Length = 1399
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 111 STTPTNFPFRGPSETRATRPGST*RAKGMTSSQEPS 4
ST P N G + TR R S+ RA+ SQE S
Sbjct: 437 STVPLNLAPSGGNTTRQRRLRSSNRARATIESQESS 472
>AE014296-40|AAN11424.1| 287|Drosophila melanogaster CG17143-PB,
isoform B protein.
Length = 287
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 92 KLVGVVDIIDQTRALIDGPGSGVSRQQIRL 181
KLV + D I + R LIDG G+G R+ + L
Sbjct: 17 KLVEMNDEIIKQRLLIDGDGTGEDRRIVVL 46
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,650,276
Number of Sequences: 53049
Number of extensions: 245377
Number of successful extensions: 497
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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