Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_N03
         (248 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   1.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   2.3  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    20   4.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   4.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   4.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   9.3  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 164 RQQIRLNQLHLTYIRLKYPFTAPTRVV 244
           R+ I +N LH  +  L YPF    R+V
Sbjct: 200 REDIGIN-LHHWHWHLVYPFEGDIRIV 225


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 167 QQIRLNQLHLTYIRLKYPFT 226
           + +R++    TYI LKYP +
Sbjct: 622 EPLRIHVSPTTYILLKYPIS 641


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = -2

Query: 181 EANLLPRNTTAGTVNKCACLINDINYANQLSF*RSIRNQGDSPWFYV--TCERHDVL 17
           EAN L  +   GTV   + LI  I+YA  L     +       WF    TC  H ++
Sbjct: 5   EANELVMSVIVGTVVIVSSLIILISYA--LILFNILHMSSAEGWFKAIGTCGSHIII 59


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 240 TRVGAVKGYFR 208
           T +GA+KGY++
Sbjct: 27  TPLGAIKGYYK 37


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 240 TRVGAVKGYFR 208
           T +GA+KGY++
Sbjct: 27  TPLGAIKGYYK 37


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = -2

Query: 79  SIRNQGDSPWFYVTCERH 26
           ++ N   +PWF    E H
Sbjct: 416 TVENNRRNPWFVEFWEHH 433


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,344
Number of Sequences: 438
Number of extensions: 1417
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)