Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M24
         (188 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250...    26   3.7  
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162...    26   3.7  
04_04_1550 - 34332948-34335986                                         26   4.9  
11_06_0529 + 24687027-24687064,24687150-24687610,24687709-246881...    25   6.4  
12_02_0811 - 23370455-23370472,23372279-23372538,23372645-233727...    25   8.5  
08_01_0923 - 9095162-9095281,9095402-9095551,9095648-9095783,909...    25   8.5  
05_01_0478 - 3910575-3912989                                           25   8.5  

>07_03_0401 +
           17724103-17724463,17724554-17724683,17725068-17725083,
           17725130-17725203,17725693-17725761,17726224-17726257
          Length = 227

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 80  ITIYLNALFKIQRGNKVFLVPSRNDTFVQWGIV 178
           + ++L AL   +R +   + P ++ TF+ W IV
Sbjct: 153 LIVHLQALLGNRRDHMEVISPMKDGTFIDWDIV 185


>07_03_0143 -
           14315097-14315130,14315594-14315662,14316152-14316225,
           14316316-14316331,14316716-14316845,14316936-14316999
          Length = 128

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 80  ITIYLNALFKIQRGNKVFLVPSRNDTFVQWGIV 178
           + ++L AL   +R +   + P ++ TF+ W IV
Sbjct: 54  LIVHLQALLGNRRDHMEVISPMKDGTFIDWDIV 86


>04_04_1550 - 34332948-34335986
          Length = 1012

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 2   SARGIEYYRSSCAHYLLARQIK 67
           SARG+ Y   SC  ++L R IK
Sbjct: 842 SARGLAYLHLSCEPHILHRDIK 863


>11_06_0529 +
           24687027-24687064,24687150-24687610,24687709-24688124,
           24688688-24688860,24689733-24689868,24689914-24690264,
           24691170-24691344,24691761-24691822
          Length = 603

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 2   SARGIEYYRSSCAHYLLARQIK 67
           +ARG+EY    CA  ++ R +K
Sbjct: 271 AARGLEYLHERCARRIVHRDVK 292


>12_02_0811 -
           23370455-23370472,23372279-23372538,23372645-23372713,
           23372979-23373105,23373187-23373422,23373509-23373678,
           23373855-23373935,23374013-23374084,23374273-23374344,
           23374450-23374588,23375141-23375643,23376817-23377010,
           23377952-23378488
          Length = 825

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 2   SARGIEYYRSSCAHYLLARQIK 67
           SA+G+EY   SC   L+ R +K
Sbjct: 731 SAQGLEYLHKSCQPPLIHRDVK 752


>08_01_0923 -
           9095162-9095281,9095402-9095551,9095648-9095783,
           9095916-9095995,9096112-9096269,9096358-9096612,
           9096804-9097205,9097287-9097408,9097623-9097741,
           9098506-9098597,9098763-9098934
          Length = 601

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 5   ARGIEYYRSSCAHYLLARQIK 67
           ARG++Y    C H ++ R IK
Sbjct: 407 ARGLQYLHMFCRHRIIHRDIK 427


>05_01_0478 - 3910575-3912989
          Length = 804

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 5   ARGIEYYRSSCAHYLLARQIKMVL*ITIYLNALF 106
           ARG+ Y   SC  Y++   IK      I L+ALF
Sbjct: 616 ARGLSYLHHSCKEYIIHCDIKPE---NILLDALF 646


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,846,646
Number of Sequences: 37544
Number of extensions: 46487
Number of successful extensions: 111
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 14,793,348
effective HSP length: 42
effective length of database: 13,216,500
effective search space used: 264330000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)