Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M24
         (188 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011159-1|AAR82827.1|  917|Drosophila melanogaster AT21454p pro...    27   2.6  
AE013599-1004|AAF58853.2|  894|Drosophila melanogaster CG2292-PA...    27   2.6  

>BT011159-1|AAR82827.1|  917|Drosophila melanogaster AT21454p
           protein.
          Length = 917

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +2

Query: 11  GIEYYRSSCAHYLLARQIKMVL*ITIYLNALFKIQRGNKVFLVPSRNDTFVQWGIV 178
           GI+YY       LL       L    Y+  L    R +KV LV  R++  V+  IV
Sbjct: 444 GIDYYHGYYRRVLLLSTTSTFLGWMFYIYRLLSRNRASKVELVLERSNKIVRVSIV 499


>AE013599-1004|AAF58853.2|  894|Drosophila melanogaster CG2292-PA
           protein.
          Length = 894

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +2

Query: 11  GIEYYRSSCAHYLLARQIKMVL*ITIYLNALFKIQRGNKVFLVPSRNDTFVQWGIV 178
           GI+YY       LL       L    Y+  L    R +KV LV  R++  V+  IV
Sbjct: 421 GIDYYHGYYRRVLLLSTTSTFLGWMFYIYRLLSRNRASKVELVLERSNKIVRVSIV 476


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,840,512
Number of Sequences: 53049
Number of extensions: 89315
Number of successful extensions: 60
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 24,988,368
effective HSP length: 43
effective length of database: 22,707,261
effective search space used: 431437959
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)