Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M24
         (188 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   3.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   3.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    19   4.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   7.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   7.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    18   9.5  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 130 HFVTSLNFKQCI 95
           +FVTSL F  C+
Sbjct: 82  YFVTSLAFADCL 93


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 3   RHEG*NIIEVVVLI 44
           RH G +I ++VVL+
Sbjct: 210 RHRGAHITDIVVLV 223


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 17  EYYRSSCAHYLLARQIKMVL*ITIYLNAL 103
           EYY  +    +LA    M++ +TI  N L
Sbjct: 29  EYYLPNWTDLVLAGLFTMLIIVTIVGNTL 57


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 68  FLFVLLVSNEHNYF 27
           FL+V  VS+E+N +
Sbjct: 619 FLYVSPVSSEYNQY 632


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 68  FLFVLLVSNEHNYF 27
           FL+V  VS+E+N +
Sbjct: 619 FLYVSPVSSEYNQY 632


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
          protein.
          Length = 1370

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 81 IYNTIFICLAS 49
          + N  F+CLAS
Sbjct: 10 LINAAFLCLAS 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,381
Number of Sequences: 438
Number of extensions: 744
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used:  2558940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)