Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_M21
(277 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein. 109 2e-24
BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein. 109 2e-24
BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protei... 109 2e-24
AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding prote... 109 2e-24
AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding prote... 109 2e-24
U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein ... 104 6e-23
AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding prote... 92 3e-19
AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding prote... 89 3e-18
AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens ... 69 4e-12
>CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein.
Length = 472
Score = 109 bits (262), Expect = 2e-24
Identities = 52/91 (57%), Positives = 67/91 (73%)
Frame = +2
Query: 5 RHELVQVIDLGKEGCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYKGIDGNWKTDKVIDI 184
RHE+VQ + L K+G PLEIRFLH+P +AQGFVGCA+ S + RFYK G W +KVI +
Sbjct: 235 RHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQV 293
Query: 185 PVKKVYKDGVESELNGLISDILISLDDKY*Y 277
P KKV K + E+ GLI+DIL+SLDD++ Y
Sbjct: 294 PPKKV-KGWLLPEMPGLITDILLSLDDRFLY 323
>BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein.
Length = 408
Score = 109 bits (262), Expect = 2e-24
Identities = 52/91 (57%), Positives = 67/91 (73%)
Frame = +2
Query: 5 RHELVQVIDLGKEGCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYKGIDGNWKTDKVIDI 184
RHE+VQ + L K+G PLEIRFLH+P +AQGFVGCA+ S + RFYK G W +KVI +
Sbjct: 171 RHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQV 229
Query: 185 PVKKVYKDGVESELNGLISDILISLDDKY*Y 277
P KKV K + E+ GLI+DIL+SLDD++ Y
Sbjct: 230 PPKKV-KGWLLPEMPGLITDILLSLDDRFLY 259
>BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protein 1
protein.
Length = 472
Score = 109 bits (262), Expect = 2e-24
Identities = 52/91 (57%), Positives = 67/91 (73%)
Frame = +2
Query: 5 RHELVQVIDLGKEGCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYKGIDGNWKTDKVIDI 184
RHE+VQ + L K+G PLEIRFLH+P +AQGFVGCA+ S + RFYK G W +KVI +
Sbjct: 235 RHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQV 293
Query: 185 PVKKVYKDGVESELNGLISDILISLDDKY*Y 277
P KKV K + E+ GLI+DIL+SLDD++ Y
Sbjct: 294 PPKKV-KGWLLPEMPGLITDILLSLDDRFLY 323
>AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding protein
1 protein.
Length = 472
Score = 109 bits (262), Expect = 2e-24
Identities = 52/91 (57%), Positives = 67/91 (73%)
Frame = +2
Query: 5 RHELVQVIDLGKEGCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYKGIDGNWKTDKVIDI 184
RHE+VQ + L K+G PLEIRFLH+P +AQGFVGCA+ S + RFYK G W +KVI +
Sbjct: 235 RHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQV 293
Query: 185 PVKKVYKDGVESELNGLISDILISLDDKY*Y 277
P KKV K + E+ GLI+DIL+SLDD++ Y
Sbjct: 294 PPKKV-KGWLLPEMPGLITDILLSLDDRFLY 323
>AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding protein
1 protein.
Length = 305
Score = 109 bits (262), Expect = 2e-24
Identities = 52/91 (57%), Positives = 67/91 (73%)
Frame = +2
Query: 5 RHELVQVIDLGKEGCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYKGIDGNWKTDKVIDI 184
RHE+VQ + L K+G PLEIRFLH+P +AQGFVGCA+ S + RFYK G W +KVI +
Sbjct: 195 RHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQV 253
Query: 185 PVKKVYKDGVESELNGLISDILISLDDKY*Y 277
P KKV K + E+ GLI+DIL+SLDD++ Y
Sbjct: 254 PPKKV-KGWLLPEMPGLITDILLSLDDRFLY 283
>U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein
protein.
Length = 472
Score = 104 bits (249), Expect = 6e-23
Identities = 50/91 (54%), Positives = 65/91 (71%)
Frame = +2
Query: 5 RHELVQVIDLGKEGCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYKGIDGNWKTDKVIDI 184
RHE+VQ + L K+G PLEIRFLH+P + QGFVGCA N+ RFYK +G W +KVI +
Sbjct: 235 RHEIVQTLSL-KDGLIPLEIRFLHNPSATQGFVGCASAPNIQRFYKTREGTWSVEKVIQV 293
Query: 185 PVKKVYKDGVESELNGLISDILISLDDKY*Y 277
P KKV K + + GLI+DIL+SLDD++ Y
Sbjct: 294 PPKKV-KGWLLPGVPGLITDILLSLDDRFLY 323
>AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding protein
1 protein.
Length = 295
Score = 91.9 bits (218), Expect = 3e-19
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +2
Query: 5 RHELVQVIDLGKEGCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYKGIDGNWKTDKVIDI 184
RHE+VQ + L K+G PLEIRFLH+P +AQGFVGCA+ S + RFYK G W +KVI +
Sbjct: 219 RHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQV 277
Query: 185 PVKKVYKDGVESELNGLIS 241
P KKV K + E+ GLI+
Sbjct: 278 PPKKV-KGWLLPEMPGLIT 295
>AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding protein
1 protein.
Length = 349
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = +2
Query: 5 RHELVQVIDLGKEGCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYKGIDGNWKTDKVIDI 184
RHE+VQ + L K+G PLEIRFLH+P +AQGFVGCA+ S + RFYK G W +KVI +
Sbjct: 277 RHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYKNEGGTWSVEKVIQV 335
Query: 185 PVKKV 199
P KKV
Sbjct: 336 PPKKV 340
>AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ13813 fis, clone THYRO1000358, moderately
similar to SELENIUM-BINDING LIVER PROTEIN. ).
Length = 235
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +2
Query: 5 RHELVQVIDLGKEGCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYK 142
RHE+VQ + L K+G PLEIRFLH+P +AQGFVGCA+ S + RFYK
Sbjct: 171 RHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFYK 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,197,583
Number of Sequences: 237096
Number of extensions: 846194
Number of successful extensions: 1662
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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