Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_M21
(277 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023835-5|CAA19490.1| 471|Caenorhabditis elegans Hypothetical ... 66 3e-12
AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical ... 27 1.4
U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical pr... 27 1.9
AL132952-7|CAB61139.2| 670|Caenorhabditis elegans Hypothetical ... 27 2.5
Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z48334-2|CAA88309.1| 357|Caenorhabditis elegans Hypothetical pr... 25 5.8
AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical... 25 5.8
AF016684-17|AAB66201.1| 463|Caenorhabditis elegans Hypothetical... 25 5.8
AL033513-2|CAA22079.2| 439|Caenorhabditis elegans Hypothetical ... 25 7.7
AL021446-4|CAA16267.2| 439|Caenorhabditis elegans Hypothetical ... 25 7.7
>AL023835-5|CAA19490.1| 471|Caenorhabditis elegans Hypothetical
protein Y37A1B.5 protein.
Length = 471
Score = 66.1 bits (154), Expect = 3e-12
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Frame = +2
Query: 17 VQVIDLGKE-GCAPLEIRFLHDPKSAQGFVGCAVQSNVYRFYKGIDGNWKTDK---VIDI 184
+Q IDL + G PLE+RFLH+P S FVGCA+ S ++R + ++ N T V I
Sbjct: 237 LQTIDLPQPLGALPLEVRFLHEPTSEHAFVGCALGSGIFRIHP-VEENSTTHAATLVAFI 295
Query: 185 PVKKVYKDGVESELNGLISDILISLDDKY*Y 277
P KKV E+ LI+DILIS+DD++ Y
Sbjct: 296 PSKKV-SGWALPEMPALITDILISMDDRFLY 325
>AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical
protein F42G8.8 protein.
Length = 487
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 209 GVESELNGLISDILISLDDKY*Y 277
G ++ LI+DILIS+DD++ Y
Sbjct: 373 GKNKKMPALITDILISMDDRFLY 395
>U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical
protein C08A9.3 protein.
Length = 739
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 196 FFYRYIDDFIGFPISINPFVKSINVGLNRTPHKTLCG 86
FFY+ F GF + + + ++ P +TLCG
Sbjct: 209 FFYQSFTTFAGFSLKKSVIGRQFHLAFTVHPDETLCG 245
>AL132952-7|CAB61139.2| 670|Caenorhabditis elegans Hypothetical
protein Y51H4A.7 protein.
Length = 670
Score = 26.6 bits (56), Expect = 2.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 63 SDFSMTLNPHKVLWGVRFSPTFIDFTKGLMEIG 161
++F+ LN + ++G RF P F F + EIG
Sbjct: 62 TEFAEELNTYGHIYGYRFMPNFDLFAPPVSEIG 94
>Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical
protein T05F1.4 protein.
Length = 203
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 152 HQSLCKIYKRWTEPHTPQNLVR 87
H++L + YK +TE PQ L++
Sbjct: 179 HEALLEAYKEYTETTCPQELLK 200
>Z48334-2|CAA88309.1| 357|Caenorhabditis elegans Hypothetical
protein F10B5.2 protein.
Length = 357
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +2
Query: 59 EIRFLHDPKS--AQGFVGCAVQSNVYRFYKGIDGNWK 163
EIRF P +Q VG +YR + + G+WK
Sbjct: 203 EIRFQDIPPLTVSQNRVGIEYSDRLYRLLRALGGDWK 239
>AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical
protein F25E5.1 protein.
Length = 1062
Score = 25.4 bits (53), Expect = 5.8
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = -1
Query: 277 ISIFIIERYKDI*YQTVQLGLDAI--FINFFYRYIDDFI--GFPISINPFVKSINVGLNR 110
I + + R++D + + L+ F NF Y ++DFI + +N +V ++R
Sbjct: 675 IRVTFLLRHRDPKLKPTRFNLNTCRTFFNFLYPALEDFIDENNVLDLNKLYPD-DVAIHR 733
Query: 109 TPHKTLCGFRVMEKSDLEGSTSFLTQIYD 23
+T F +DLEGS + +YD
Sbjct: 734 LIAQTY--FVGHGLTDLEGSEKYDRSVYD 760
>AF016684-17|AAB66201.1| 463|Caenorhabditis elegans Hypothetical
protein F45C12.1 protein.
Length = 463
Score = 25.4 bits (53), Expect = 5.8
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 148 NPFVKSINVGLNRTPHKTLCGFRVMEKSDLEG----STSFLTQIYDLYQF 11
N +KS ++ + P K C FR K+ ++G + S LT + L F
Sbjct: 95 NSQIKSFSIFQEKKPIKMFCDFRRYTKNSVDGVKIVNNSQLTDLESLKNF 144
>AL033513-2|CAA22079.2| 439|Caenorhabditis elegans Hypothetical
protein Y70D2A.1 protein.
Length = 439
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 140 KGIDGNWKTDKVIDIPVKKVYKDGVESELNGLISDILI 253
+GIDGN K D K G +S G+ +D LI
Sbjct: 382 RGIDGNDNDSKKFDDSRNSSLKSGKDSVRRGVPADSLI 419
>AL021446-4|CAA16267.2| 439|Caenorhabditis elegans Hypothetical
protein Y70D2A.1 protein.
Length = 439
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 140 KGIDGNWKTDKVIDIPVKKVYKDGVESELNGLISDILI 253
+GIDGN K D K G +S G+ +D LI
Sbjct: 382 RGIDGNDNDSKKFDDSRNSSLKSGKDSVRRGVPADSLI 419
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,932,786
Number of Sequences: 27780
Number of extensions: 142735
Number of successful extensions: 363
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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