Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_M19
(379 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 208 8e-55
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 208 8e-55
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 208 8e-55
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 51 3e-07
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 39 0.001
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 32 0.16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 32 0.16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 32 0.16
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 0.63
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 1.5
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 28 1.9
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 1.9
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 1.9
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 1.9
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 28 2.5
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 28 2.5
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 28 2.5
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 27 4.5
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 27 4.5
U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical pr... 27 4.5
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 27 4.5
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 27 4.5
U00032-9|AAA50631.1| 229|Caenorhabditis elegans Hypothetical pr... 27 4.5
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 4.5
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 27 5.9
AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical... 27 5.9
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 26 7.8
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 26 7.8
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 26 7.8
AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical ... 26 7.8
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 26 7.8
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 208 bits (509), Expect = 8e-55
Identities = 95/123 (77%), Positives = 106/123 (86%)
Frame = +1
Query: 10 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 189
TEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI+
Sbjct: 253 TEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVII 312
Query: 190 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 369
+NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P
Sbjct: 313 MNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIP 372
Query: 370 SKP 378
+KP
Sbjct: 373 TKP 375
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 208 bits (509), Expect = 8e-55
Identities = 95/123 (77%), Positives = 106/123 (86%)
Frame = +1
Query: 10 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 189
TEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI+
Sbjct: 287 TEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVII 346
Query: 190 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 369
+NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P
Sbjct: 347 MNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIP 406
Query: 370 SKP 378
+KP
Sbjct: 407 TKP 409
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 208 bits (509), Expect = 8e-55
Identities = 95/123 (77%), Positives = 106/123 (86%)
Frame = +1
Query: 10 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 189
TEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI+
Sbjct: 287 TEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVII 346
Query: 190 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 369
+NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P
Sbjct: 347 MNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIP 406
Query: 370 SKP 378
+KP
Sbjct: 407 TKP 409
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 50.8 bits (116), Expect = 3e-07
Identities = 30/110 (27%), Positives = 54/110 (49%)
Frame = +1
Query: 49 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTP 228
+ V GDN+ F +K + EL+ G++ + G F A+V+VL H I++GY+
Sbjct: 392 ERVVAGDNIKFKLKGIEENELQGGFIICSPDSLAKTGRV-FDAEVLVLEHRSIIASGYSC 450
Query: 229 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKP 378
VL +A + +D++TG+ + K +K + I+ L +P
Sbjct: 451 VLHIQSAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEKCIMRLESPEP 498
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/96 (26%), Positives = 43/96 (44%)
Frame = +1
Query: 16 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 195
+KS+ + G + F +K + K++R+G V D K P F A+++VL+
Sbjct: 420 IKSIHRKRMPVGIVKCGQSASFALKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLH 478
Query: 196 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 303
HP I Y +L + + ++V RTG
Sbjct: 479 HPTTIKPNYQAMLHIGSVRQTATLVSMGKEV-LRTG 513
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 31.9 bits (69), Expect = 0.16
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +1
Query: 7 GTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 126
GT VKSV E + + +A PGD +G ++ + K++RRG V
Sbjct: 293 GTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCV 336
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.16
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +1
Query: 7 GTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 126
GT VKSV E + + +A PGD +G ++ + K++RRG V
Sbjct: 294 GTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCV 337
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.16
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +1
Query: 7 GTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 126
GT VKSV E + + +A PGD +G ++ + K++RRG V
Sbjct: 294 GTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCV 337
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 0.63
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 234 GLPHSPHSLQICRNQRESRPSYW*INR 314
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 266 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPP 373
LPK+ T V + TT+ P +PP +T PP
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPP 299
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 16 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 195
V S+ +A+ PG+ ++ LRRG V + + PP +FTA +++L
Sbjct: 450 VGSIRRSRQAVGCVNPGEAASISLNLPDGVSLRRGMVLAEIDHQPP-VCYEFTANLLLLC 508
Query: 196 H 198
H
Sbjct: 509 H 509
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 232 LDCHTAHIACKFAEIKEKVDRRTGKSTE 315
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 232 LDCHTAHIACKFAEIKEKVDRRTGKSTE 315
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 232 LDCHTAHIACKFAEIKEKVDRRTGKSTE 315
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 134 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 39
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 134 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 39
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 134 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 39
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 134 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 39
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 139 KNNPPRGAAD-FTAQVIVLNHP 201
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 139 KNNPPRGAAD-FTAQVIVLNHP 201
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 182 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTAS 51
T A +AAP GGLF + T P T T +P TA+
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAA 511
>U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical
protein F47C10.4 protein.
Length = 357
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 149 HPGELQTSQRKSLC*ITQVKYQTDTHLYWI 238
H G + ++ SLC +T Y+ +LYWI
Sbjct: 311 HNGSSRFTELLSLCTVTNKYYEDVQYLYWI 340
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +1
Query: 22 SVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSK 141
+++M + + A GD+ G+ + N+ ++L RG+ D +
Sbjct: 268 AIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDER 307
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +1
Query: 22 SVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSK 141
+++M + + A GD+ G+ + N+ ++L RG+ D +
Sbjct: 268 AIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDER 307
>U00032-9|AAA50631.1| 229|Caenorhabditis elegans Hypothetical
protein F37A4.3 protein.
Length = 229
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 101 TDTFLTLKPTLSPGTASCRASWCISTD 21
T FLTL+ T T C+ SWC D
Sbjct: 42 TSLFLTLQSTGPEMTNLCKKSWCDKVD 68
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 268 AEIKEKVDRRTGKSTEDNPKS 330
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical protein
C46A5.4 protein.
Length = 1432
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 49 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRG 159
+EA+P N + ++V RR +VAGD ++N G
Sbjct: 983 KEALPQGNQERDCRSVLQNRQRRCFVAGDERSNEQPG 1019
>AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical
protein Y110A2AL.1 protein.
Length = 142
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 112 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQI 210
RR Y D P+GA DF AQ++ PG I
Sbjct: 64 RRHYF--DLHGMTPQGAVDFVAQIVEGRRPGYI 94
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 232 LDCHTAHIACKFAEIKEKVDRRTGKSTE 315
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 232 LDCHTAHIACKFAEIKEKVDRRTGKSTE 315
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 178 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKE 282
Q+++LNHP QI +L A C+F ++E
Sbjct: 1375 QILLLNHPNQIGKSTCYILMSDVAKY-CRFLVVEE 1408
>AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical
protein ZK994.1 protein.
Length = 554
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 126 NVTTAQFLDRYVFDVETN 73
N TTA FLD Y+F V T+
Sbjct: 384 NSTTATFLDDYIFHVPTS 401
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 232 LDCHTAHIACKFAEIKEKVDRRTGKSTE 315
L C ++C+ + +K+K + T KS E
Sbjct: 525 LQCQNEKLSCELSSLKDKHEEATSKSIE 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.130 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,039,262
Number of Sequences: 27780
Number of extensions: 223726
Number of successful extensions: 485
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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