Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_M19
(379 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 250 5e-69
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 244 3e-67
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 235 1e-64
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 97 8e-23
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.68
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 22 2.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 2.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 2.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 3.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 6.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 6.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 6.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 6.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 8.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 8.4
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 20 8.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 8.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 8.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 250 bits (611), Expect = 5e-69
Identities = 116/123 (94%), Positives = 120/123 (97%)
Frame = +1
Query: 10 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 189
TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIV
Sbjct: 287 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIV 346
Query: 190 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 369
LNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVP
Sbjct: 347 LNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVP 406
Query: 370 SKP 378
SKP
Sbjct: 407 SKP 409
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 244 bits (597), Expect = 3e-67
Identities = 113/123 (91%), Positives = 118/123 (95%)
Frame = +1
Query: 10 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 189
TEVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIV
Sbjct: 287 TEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIV 346
Query: 190 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 369
LNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P
Sbjct: 347 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQP 406
Query: 370 SKP 378
+KP
Sbjct: 407 TKP 409
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 235 bits (576), Expect = 1e-64
Identities = 109/119 (91%), Positives = 114/119 (95%)
Frame = +1
Query: 19 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 198
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 199 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 375
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 96.7 bits (230), Expect = 8e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 10 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 144
TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 230 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.68
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 141 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 251
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 22.2 bits (45), Expect = 2.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 2 HEVLKSSPWKCTTRLYKKLYPVTMLVSTSKTY 97
HE +S KC + K LY T+L + Y
Sbjct: 50 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 81
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 2.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 97 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 204
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 284 KSTVVLVNQQRTTLNPLNLVM 346
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 3.6
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 68 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 190
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 6.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 284 KSTVVLVNQQRTTLNPLNLVM 346
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 6.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 284 KSTVVLVNQQRTTLNPLNLVM 346
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 6.4
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 156 GSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESR 290
G LHSA S SN+ + T + P +Q + ++S+
Sbjct: 938 GHSVLHSAQSVVASSASNVTNVTTNLTTILPPVKVQSQQQSQQSQ 982
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 6.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 144 QPTQGSCRLHSASHCAKSPRS 206
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 8.4
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 277 KEKVDRRTGKSTEDNPKSIKS 339
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 8.4
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 277 KEKVDRRTGKSTEDNPKSIKS 339
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 8.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 308 QQRTTLNPLNLVMPPLSTW 364
+ RT L+P N +P + W
Sbjct: 380 KSRTNLDPSNRKLPAPANW 398
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 284 KSTVVLVNQQRTTLNPLNLVM 346
KST +R T+NP ++++
Sbjct: 142 KSTTTTAEVKRDTINPEDVIL 162
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 8.4
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = +3
Query: 132 RFEKQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESRPS 296
+ K P S ++ S S N+ R G+P ++ RNQ++ S
Sbjct: 1261 QMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQRAMTEARNQQQQASS 1315
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.312 0.130 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,839
Number of Sequences: 438
Number of extensions: 2575
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9176370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)
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