Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M17
         (430 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   0.86 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.1  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    22   8.0  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    22   8.0  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 25.4 bits (53), Expect = 0.86
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
 Frame = +1

Query: 136 P*SSVRKS-ELTVLV----ASVAWCSVLRLIRVPMWLLSM---ILSLVLTTWCTFSSMIR 291
           P S+VR+   LTV+     AS  WC  LR      WL      ++  V++++ T S    
Sbjct: 750 PSSNVRRVIALTVVAKVRYASPIWCHTLRFANRRQWLRRFYRPVVQRVISSFRTTSHDAV 809

Query: 292 LTVVSRVPLRP*MDTSS*TERR 357
             +   +PL   +D  S T  R
Sbjct: 810 CVLAGMIPLHLLLDEDSRTFHR 831


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 173 WSHRSPGAPCF 205
           W +R+P APCF
Sbjct: 189 WEYRAPNAPCF 199


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 273  LFQYDSTHGRFKGTVEAVDGHLVVNGKKIAVFSERDPHAIP 395
            L + D+T G    T  + + H++ NG    V + + P A P
Sbjct: 1201 LMKKDATLGGNATTSTSNEAHVIANGHDGPVSAGKPPQAPP 1241


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = -2

Query: 423 QRIQHQPDPME---*HGDPSQRTQLSSFRLRRGVH 328
           Q++QHQP P      +    Q   L++  L  GVH
Sbjct: 82  QQVQHQPQPPSTPFANVSTGQNESLANLLLHPGVH 116


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = -2

Query: 423 QRIQHQPDPME---*HGDPSQRTQLSSFRLRRGVH 328
           Q++QHQP P      +    Q   L++  L  GVH
Sbjct: 83  QQVQHQPQPPSTPFANVSTGQNESLANLLLHPGVH 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,309
Number of Sequences: 2352
Number of extensions: 8794
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)