Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_M16
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 241 2e-64
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 241 2e-64
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 241 2e-64
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 241 2e-64
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 234 2e-62
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 234 2e-62
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 233 5e-62
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 231 2e-61
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 228 1e-60
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 227 2e-60
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 227 2e-60
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 225 1e-59
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 219 9e-58
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 215 1e-56
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 215 1e-56
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 209 7e-55
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 131 2e-31
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 130 4e-31
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 128 1e-30
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 127 4e-30
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 127 4e-30
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 127 4e-30
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 106 6e-24
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 106 6e-24
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 65 2e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 65 2e-11
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 29 1.0
AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine r... 29 1.8
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 3.1
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 3.1
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 3.1
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 3.1
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 3.1
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 3.1
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 3.1
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 3.1
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 4.1
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 5.5
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 5.5
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 5.5
Z81546-6|CAB04457.1| 425|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 27 7.2
AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical ... 27 7.2
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z48241-8|CAD44101.1| 589|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z48241-2|CAB54194.1| 624|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z36237-4|CAD44107.1| 589|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical pr... 26 9.5
AC006677-1|AAF39948.1| 331|Caenorhabditis elegans Serpentine re... 26 9.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 241 bits (589), Expect = 2e-64
Identities = 109/138 (78%), Positives = 121/138 (87%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
++F+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+K
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 166
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF+IYP PQVSTAVVEP
Sbjct: 167 LEFSIYPAPQVSTAVVEP 184
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 241 bits (589), Expect = 2e-64
Identities = 109/138 (78%), Positives = 121/138 (87%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
++F+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG
Sbjct: 46 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 105
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+K
Sbjct: 106 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 165
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF+IYP PQVSTAVVEP
Sbjct: 166 LEFSIYPAPQVSTAVVEP 183
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 241 bits (589), Expect = 2e-64
Identities = 109/138 (78%), Positives = 121/138 (87%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
++F+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+K
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 166
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF+IYP PQVSTAVVEP
Sbjct: 167 LEFSIYPAPQVSTAVVEP 184
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 241 bits (589), Expect = 2e-64
Identities = 109/138 (78%), Positives = 121/138 (87%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
++F+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+K
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 166
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF+IYP PQVSTAVVEP
Sbjct: 167 LEFSIYPAPQVSTAVVEP 184
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 234 bits (572), Expect = 2e-62
Identities = 103/138 (74%), Positives = 121/138 (87%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E+F TFFS+TG+G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 45 ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSK
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF+IYP PQVSTAVVEP
Sbjct: 165 LEFSIYPAPQVSTAVVEP 182
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 234 bits (572), Expect = 2e-62
Identities = 103/138 (74%), Positives = 121/138 (87%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E+F TFFS+TG+G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 45 ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSK
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF+IYP PQVSTAVVEP
Sbjct: 165 LEFSIYPAPQVSTAVVEP 182
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 233 bits (569), Expect = 5e-62
Identities = 103/138 (74%), Positives = 120/138 (86%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E+F TFFS+TG G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 45 ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSK
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF+IYP PQVSTAVVEP
Sbjct: 165 LEFSIYPAPQVSTAVVEP 182
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 231 bits (564), Expect = 2e-61
Identities = 102/138 (73%), Positives = 119/138 (86%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E+F TFFS+TG G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 45 ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSK
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF+IYP PQV TAVVEP
Sbjct: 165 LEFSIYPAPQVCTAVVEP 182
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 228 bits (558), Expect = 1e-60
Identities = 101/138 (73%), Positives = 117/138 (84%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
++FNTFFSET AGKHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARG
Sbjct: 52 DSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG 111
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYTIGKEI+D+V+DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSK
Sbjct: 112 HYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSK 171
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF IYP PQVST++VEP
Sbjct: 172 LEFCIYPAPQVSTSMVEP 189
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 227 bits (555), Expect = 2e-60
Identities = 100/137 (72%), Positives = 117/137 (85%)
Frame = +2
Query: 8 AFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 187
+F TFFS+TG G++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGH
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGH 105
Query: 188 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 367
YT+GKE++D LDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKL
Sbjct: 106 YTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 165
Query: 368 EFAIYPEPQVSTAVVEP 418
EF+IYP PQVSTAVVEP
Sbjct: 166 EFSIYPAPQVSTAVVEP 182
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 227 bits (555), Expect = 2e-60
Identities = 100/137 (72%), Positives = 117/137 (85%)
Frame = +2
Query: 8 AFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 187
+F TFFS+TG G++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGH
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGH 105
Query: 188 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 367
YT+GKE++D LDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKL
Sbjct: 106 YTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 165
Query: 368 EFAIYPEPQVSTAVVEP 418
EF+IYP PQVSTAVVEP
Sbjct: 166 EFSIYPAPQVSTAVVEP 182
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 225 bits (550), Expect = 1e-59
Identities = 97/138 (70%), Positives = 120/138 (86%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
+++NTFFSET +GKHVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARG
Sbjct: 47 QSYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARG 106
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYTIGKE++D+V+DR+R+L ++C LQGFLIFH L+MERLS+DYGKK+K
Sbjct: 107 HYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAK 166
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF+IYP PQ+ST++VEP
Sbjct: 167 LEFSIYPAPQISTSMVEP 184
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 219 bits (534), Expect = 9e-58
Identities = 94/137 (68%), Positives = 114/137 (83%)
Frame = +2
Query: 8 AFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 187
+ TFFS+TG G+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGH
Sbjct: 45 SLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGH 104
Query: 188 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 367
YT+GKEI+D LDRIR+LA+ C GLQGF +FH +LMERLS +YGKKSKL
Sbjct: 105 YTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKL 164
Query: 368 EFAIYPEPQVSTAVVEP 418
EF+IYP PQ+ST+VVEP
Sbjct: 165 EFSIYPAPQISTSVVEP 181
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 215 bits (525), Expect = 1e-56
Identities = 96/138 (69%), Positives = 113/138 (81%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E NTFF+ET GKHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG
Sbjct: 53 ETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARG 112
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
YTIG+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS +YGKK K
Sbjct: 113 RYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPK 172
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEFAIYP PQVST++VEP
Sbjct: 173 LEFAIYPAPQVSTSMVEP 190
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 215 bits (525), Expect = 1e-56
Identities = 96/138 (69%), Positives = 113/138 (81%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E NTFF+ET GKHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG
Sbjct: 25 ETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARG 84
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
YTIG+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS +YGKK K
Sbjct: 85 RYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPK 144
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEFAIYP PQVST++VEP
Sbjct: 145 LEFAIYPAPQVSTSMVEP 162
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 209 bits (510), Expect = 7e-55
Identities = 92/138 (66%), Positives = 111/138 (80%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
++ FFSE+ GKHVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARG
Sbjct: 50 QSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG 109
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYTIGKE++D+VLDRIRK + C GLQGFL+FH LLMERLSV++GKKSK
Sbjct: 110 HYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSK 169
Query: 365 LEFAIYPEPQVSTAVVEP 418
LEF++YP PQVST+VVEP
Sbjct: 170 LEFSVYPAPQVSTSVVEP 187
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 131 bits (316), Expect = 2e-31
Identities = 60/138 (43%), Positives = 84/138 (60%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E N +++E GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G
Sbjct: 45 ERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT G E+VD VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
F++ P P+VS VVEP
Sbjct: 165 SSFSVVPSPKVSDTVVEP 182
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 130 bits (314), Expect = 4e-31
Identities = 59/138 (42%), Positives = 83/138 (60%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E N +++E GK+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+G
Sbjct: 45 ERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT G E+VD VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
+ F++ P P+VS VVEP
Sbjct: 165 MTFSVVPSPKVSDTVVEP 182
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 128 bits (310), Expect = 1e-30
Identities = 60/138 (43%), Positives = 84/138 (60%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E + +++E GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G
Sbjct: 45 ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT G E+VD VLD IRK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
F++ P P+VS VVEP
Sbjct: 165 SSFSVVPSPKVSDTVVEP 182
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 127 bits (306), Expect = 4e-30
Identities = 59/138 (42%), Positives = 84/138 (60%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E + +++E GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G
Sbjct: 45 ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT G E+VD VLD IRK A+ C LQGF + H LL+ ++ ++ +
Sbjct: 105 HYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIM 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
F++ P P+VS VVEP
Sbjct: 165 SSFSVVPSPKVSDTVVEP 182
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 127 bits (306), Expect = 4e-30
Identities = 59/138 (42%), Positives = 84/138 (60%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E N +++E G+ K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G
Sbjct: 45 ERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT G E+VD VLD +RK A+ LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
F++ P P+VS VVEP
Sbjct: 165 NTFSVVPSPKVSDTVVEP 182
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 127 bits (306), Expect = 4e-30
Identities = 59/138 (42%), Positives = 84/138 (60%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E N +++E G+ K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G
Sbjct: 45 ERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
HYT G E+VD VLD +RK A+ LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
F++ P P+VS VVEP
Sbjct: 165 NTFSVVPSPKVSDTVVEP 182
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 106 bits (255), Expect = 6e-24
Identities = 52/138 (37%), Positives = 78/138 (56%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E +++ E K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG
Sbjct: 45 ERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
+Y G EIVD VL IR+ A+ L+GF + H LL+ +L +Y K+
Sbjct: 105 YYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTL 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
+I P +VS VVEP
Sbjct: 165 STCSIIPSAKVSDTVVEP 182
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 106 bits (255), Expect = 6e-24
Identities = 52/138 (37%), Positives = 78/138 (56%)
Frame = +2
Query: 5 EAFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 184
E +++ E K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG
Sbjct: 45 ERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
Query: 185 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 364
+Y G EIVD VL IR+ A+ L+GF + H LL+ +L +Y K+
Sbjct: 105 YYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTL 164
Query: 365 LEFAIYPEPQVSTAVVEP 418
+I P +VS VVEP
Sbjct: 165 STCSIIPSAKVSDTVVEP 182
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 65.3 bits (152), Expect = 2e-11
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Frame = +2
Query: 23 FSETGAGKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 193
F + +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YC 111
Query: 194 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 373
G+E+ + ++D I + A+ L G L H LL+ERL + KK +
Sbjct: 112 QGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTY 171
Query: 374 AIYPEPQVSTAVV 412
+++ ST VV
Sbjct: 172 SVFANSDTSTDVV 184
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 65.3 bits (152), Expect = 2e-11
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Frame = +2
Query: 23 FSETGAGKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 193
F + +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YC 111
Query: 194 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 373
G+E+ + ++D I + A+ L G L H LL+ERL + KK +
Sbjct: 112 QGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTY 171
Query: 374 AIYPEPQVSTAVV 412
+++ ST VV
Sbjct: 172 SVFANSDTSTDVV 184
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = -2
Query: 367 QFRLLAVVNGESL---HEERSETR-TGATTERVEDEESLEACALV-SEFADAVEDQV 212
+F +L V+ G+ H +++E + T T+ VE S AC L +E+ADA++D++
Sbjct: 108 KFEVLGVLEGKDQAVEHPKKTENKETENETDNVETPNS-SACILSDNEYADAIDDEI 163
>AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine
receptor, class x protein24 protein.
Length = 287
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -2
Query: 199 SNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGF 77
S G++T ++ VC I++ LF++ + + S+ LV+ S F
Sbjct: 38 SFGIITKNLAVCNIVMCGLGLFFLFPMQLAPSSVLVDNSHF 78
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 86 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 229
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 86 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 229
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 86 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 229
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 86 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 229
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 86 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 229
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 86 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 229
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 86 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 229
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 86 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 229
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/85 (23%), Positives = 33/85 (38%)
Frame = -2
Query: 385 GIDSELQFRLLAVVNGESLHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYD 206
G+D E QF + N S+H++ T ++EA L F + +
Sbjct: 639 GLDKETQFEMCTEYNSPSIHDKEILTNANVGEVLPVPVNAMEAHNLTGMFDKVIASMTFQ 698
Query: 205 FLSNGVVTTSIVVCGILLTSDKLFW 131
L N VV + G + K+F+
Sbjct: 699 EL-NDVVPAHTSI-GFSVAHRKIFF 721
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 17 TFFSETGAGKHVPRAVFVDLEPTVVD 94
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 17 TFFSETGAGKHVPRAVFVDLEPTVVD 94
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 17 TFFSETGAGKHVPRAVFVDLEPTVVD 94
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
>Z81546-6|CAB04457.1| 425|Caenorhabditis elegans Hypothetical
protein F53A2.9 protein.
Length = 425
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 2 HEAFNTFFSETGAGKHVPRAVF-VDLEPTVVDE--VRTGTYRQLFHPEQLITGKEDAANN 172
H A N F VP A+ +D + ++D + G Q+FH + TGK + N
Sbjct: 200 HGANNIRFINNWLDNLVPNAIDPLDDKKKIIDVEFLDVGKLDQIFHHSLMTTGKVNLTFN 259
Query: 173 YARGHYT 193
H+T
Sbjct: 260 RVSTHFT 266
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 292 WWHRFWFHFSPHGA 333
WW FWF+F +GA
Sbjct: 146 WWMTFWFNFLYYGA 159
>AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical
protein Y23H5B.4 protein.
Length = 407
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/69 (21%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 220 DQVYDFLSNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLA 41
+ V+D LS + V+C ++ + +++ VC N+SG I++ ++L+
Sbjct: 313 NNVFDLLSLINSAVNFVLCALMSHVFRREFLQTFGVCCPQSSENHSGAPINKTSNRSILS 372
Query: 40 S-SGLAEER 17
+ S +A+ +
Sbjct: 373 TFSNIAKPK 381
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 248 GQRVCGCGRGPSLRFPFQWCSDH 180
G +V C R PS+R + WCS++
Sbjct: 128 GVKVRVCIRPPSMRRRYSWCSEN 150
>Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical
protein F49E11.5 protein.
Length = 212
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 184 TTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDG 59
TT+ + CGI S F + + VC + NY G I + G
Sbjct: 151 TTNKIGCGISKCSSDSFGTQYVVVCLYSPAGNYIGMDIYKSG 192
>Z48241-8|CAD44101.1| 589|Caenorhabditis elegans Hypothetical
protein C48D5.2c protein.
Length = 589
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 57 VPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTTPLER 203
+PSS I+N + LAHT S F +V TT++++TT ER
Sbjct: 377 IPSSGIVNRYIACQGPLAHTSSDF----WVMVWEQHCTTIVMLTTITER 421
>Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 57 VPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTTPLER 203
+PSS I+N + LAHT S F +V TT++++TT ER
Sbjct: 814 IPSSGIVNRYIACQGPLAHTSSDF----WVMVWEQHCTTIVMLTTITER 858
>Z48241-2|CAB54194.1| 624|Caenorhabditis elegans Hypothetical
protein C48D5.2b protein.
Length = 624
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 57 VPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTTPLER 203
+PSS I+N + LAHT S F +V TT++++TT ER
Sbjct: 412 IPSSGIVNRYIACQGPLAHTSSDF----WVMVWEQHCTTIVMLTTITER 456
>Z36237-4|CAD44107.1| 589|Caenorhabditis elegans Hypothetical
protein C48D5.2c protein.
Length = 589
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 57 VPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTTPLER 203
+PSS I+N + LAHT S F +V TT++++TT ER
Sbjct: 377 IPSSGIVNRYIACQGPLAHTSSDF----WVMVWEQHCTTIVMLTTITER 421
>Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 57 VPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTTPLER 203
+PSS I+N + LAHT S F +V TT++++TT ER
Sbjct: 814 IPSSGIVNRYIACQGPLAHTSSDF----WVMVWEQHCTTIVMLTTITER 858
>AC006677-1|AAF39948.1| 331|Caenorhabditis elegans Serpentine
receptor, class x protein26 protein.
Length = 331
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 199 SNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGF 77
S G++T ++ VC I + LF++ + + S+ LV+ S F
Sbjct: 38 SFGIITKNLAVCNIGMCGLCLFFLFPMQLAPSSFLVDNSHF 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,059,107
Number of Sequences: 27780
Number of extensions: 214624
Number of successful extensions: 684
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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