Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M14
         (333 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041092-1|AAH41092.1|  403|Homo sapiens RUN and FYVE domain con...    28   7.9  
AY528716-1|AAT44401.1|  376|Homo sapiens antigen MU-RMS-40.17 pr...    28   7.9  
AL136233-2|CAI17235.1|  232|Homo sapiens RUN and FYVE domain con...    28   7.9  
AK000925-1|BAA91429.1|  232|Homo sapiens protein ( Homo sapiens ...    28   7.9  
AF461266-1|AAL67520.1|  606|Homo sapiens RUFY2 protein.                28   7.9  
AF411980-1|AAL04164.1|  590|Homo sapiens Run- and FYVE-domain co...    28   7.9  
AB040970-1|BAA96061.1|  619|Homo sapiens KIAA1537 protein protein.     28   7.9  

>BC041092-1|AAH41092.1|  403|Homo sapiens RUN and FYVE domain
           containing 2 protein.
          Length = 403

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 230 LKIFSHFMVHCLKHGLKTTLDLLS 159
           L+ F   M HCLKHGLK     LS
Sbjct: 43  LQQFFVVMEHCLKHGLKVRKSFLS 66


>AY528716-1|AAT44401.1|  376|Homo sapiens antigen MU-RMS-40.17
           protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 230 LKIFSHFMVHCLKHGLKTTLDLLS 159
           L+ F   M HCLKHGLK     LS
Sbjct: 43  LQQFFVVMEHCLKHGLKVRKSFLS 66


>AL136233-2|CAI17235.1|  232|Homo sapiens RUN and FYVE domain
           containing 2 protein.
          Length = 232

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 230 LKIFSHFMVHCLKHGLKTTLDLLS 159
           L+ F   M HCLKHGLK     LS
Sbjct: 43  LQQFFVVMEHCLKHGLKVRKSFLS 66


>AK000925-1|BAA91429.1|  232|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10063 fis, clone HEMBA1001446. ).
          Length = 232

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 230 LKIFSHFMVHCLKHGLKTTLDLLS 159
           L+ F   M HCLKHGLK     LS
Sbjct: 43  LQQFFVVMEHCLKHGLKVRKSFLS 66


>AF461266-1|AAL67520.1|  606|Homo sapiens RUFY2 protein.
          Length = 606

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 230 LKIFSHFMVHCLKHGLKTTLDLLS 159
           L+ F   M HCLKHGLK     LS
Sbjct: 43  LQQFFVVMEHCLKHGLKVRKSFLS 66


>AF411980-1|AAL04164.1|  590|Homo sapiens Run- and FYVE-domain
           containing protein Rabip4R protein.
          Length = 590

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 230 LKIFSHFMVHCLKHGLKTTLDLLS 159
           L+ F   M HCLKHGLK     LS
Sbjct: 27  LQQFFVVMEHCLKHGLKVRKSFLS 50


>AB040970-1|BAA96061.1|  619|Homo sapiens KIAA1537 protein protein.
          Length = 619

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 230 LKIFSHFMVHCLKHGLKTTLDLLS 159
           L+ F   M HCLKHGLK     LS
Sbjct: 56  LQQFFVVMEHCLKHGLKVRKSFLS 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,218,893
Number of Sequences: 237096
Number of extensions: 628015
Number of successful extensions: 697
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)