Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_M13
(380 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 103 6e-23
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 103 6e-23
AY119586-1|AAM50240.1| 719|Drosophila melanogaster LD15094p pro... 54 6e-08
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P... 54 6e-08
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P... 54 6e-08
EU000366-1|ABS19623.1| 562|Drosophila melanogaster truncated cr... 27 6.2
AF288223-1|AAG01337.2| 751|Drosophila melanogaster Crossveinles... 27 6.2
AE013599-3194|AAF46719.2| 751|Drosophila melanogaster CG15671-P... 27 6.2
BT011200-1|AAR88564.1| 337|Drosophila melanogaster AT31252p pro... 27 8.2
AE014134-558|AAF51146.1| 336|Drosophila melanogaster CG8822-PA ... 27 8.2
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 103 bits (248), Expect = 6e-23
Identities = 50/119 (42%), Positives = 74/119 (62%)
Frame = +1
Query: 22 GKHLTFPGQCRYVLIHDYVDRNFTVLLQLQNGQPKALVLEDKSGTIIELKDNGQVTLNGA 201
G + +PG C+Y+L D VD NFT++ QL NG+ K++ L D+ G+ E+ DN + LNG
Sbjct: 2801 GLNFAYPGNCKYILAQDSVDNNFTIIGQLTNGKLKSITLIDREGSYFEVADNLALKLNGN 2860
Query: 202 AHGFPVIEKDVFAFKQTNGRIGLGSKYGLMAFCTSKLEVCYFEVNGFYLGKLRGLLGDG 378
+P + A+++ I L S+YG+ CTS L+VC+ +NGFY K RGLLG+G
Sbjct: 2861 LVEYPQHLSGLHAWRRFY-TIHLYSEYGVGIVCTSDLKVCHININGFYTSKTRGLLGNG 2918
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 103 bits (248), Expect = 6e-23
Identities = 50/119 (42%), Positives = 74/119 (62%)
Frame = +1
Query: 22 GKHLTFPGQCRYVLIHDYVDRNFTVLLQLQNGQPKALVLEDKSGTIIELKDNGQVTLNGA 201
G + +PG C+Y+L D VD NFT++ QL NG+ K++ L D+ G+ E+ DN + LNG
Sbjct: 2801 GLNFAYPGNCKYILAQDSVDNNFTIIGQLTNGKLKSITLIDREGSYFEVADNLALKLNGN 2860
Query: 202 AHGFPVIEKDVFAFKQTNGRIGLGSKYGLMAFCTSKLEVCYFEVNGFYLGKLRGLLGDG 378
+P + A+++ I L S+YG+ CTS L+VC+ +NGFY K RGLLG+G
Sbjct: 2861 LVEYPQHLSGLHAWRRFY-TIHLYSEYGVGIVCTSDLKVCHININGFYTSKTRGLLGNG 2918
>AY119586-1|AAM50240.1| 719|Drosophila melanogaster LD15094p
protein.
Length = 719
Score = 54.0 bits (124), Expect = 6e-08
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Frame = +1
Query: 46 QCRYVLIHDYVDRNFTVLLQLQNGQPKALVLEDK-----SGTIIELK-DNGQVTLNGAAH 207
QC Y+L HD+ RNFT+LL+ + L K +G +IE+ + +++NG
Sbjct: 165 QCSYLLAHDFFKRNFTLLLEPASKSLAGQGLTRKLSFIANGQLIEIDLETDHISINGNPQ 224
Query: 208 GF-PVIEKDVFAFKQTNGRIGLGSKYGLMAFCTSKLEVCYFEVNGFYLGKLRGLLG 372
P+ DV + + + + S C + ++C+FEV+G+Y G+ GLLG
Sbjct: 225 PILPLKLGDVNIHRDLDV-LSITSDTEFSLHCNVQFDLCWFEVSGWYFGRTAGLLG 279
>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
isoform A protein.
Length = 4345
Score = 54.0 bits (124), Expect = 6e-08
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Frame = +1
Query: 46 QCRYVLIHDYVDRNFTVLLQLQNGQPKALVLEDK-----SGTIIELK-DNGQVTLNGAAH 207
QC Y+L HD+ RNFT+LL+ + L K +G +IE+ + +++NG
Sbjct: 3791 QCSYLLAHDFFKRNFTLLLEPASKSLAGQGLTRKLSFIANGQLIEIDLETDHISINGNPQ 3850
Query: 208 GF-PVIEKDVFAFKQTNGRIGLGSKYGLMAFCTSKLEVCYFEVNGFYLGKLRGLLG 372
P+ DV + + + + S C + ++C+FEV+G+Y G+ GLLG
Sbjct: 3851 PILPLKLGDVNIHRDLDV-LSITSDTEFSLHCNVQFDLCWFEVSGWYFGRTAGLLG 3905
>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
isoform B protein.
Length = 4374
Score = 54.0 bits (124), Expect = 6e-08
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Frame = +1
Query: 46 QCRYVLIHDYVDRNFTVLLQLQNGQPKALVLEDK-----SGTIIELK-DNGQVTLNGAAH 207
QC Y+L HD+ RNFT+LL+ + L K +G +IE+ + +++NG
Sbjct: 3820 QCSYLLAHDFFKRNFTLLLEPASKSLAGQGLTRKLSFIANGQLIEIDLETDHISINGNPQ 3879
Query: 208 GF-PVIEKDVFAFKQTNGRIGLGSKYGLMAFCTSKLEVCYFEVNGFYLGKLRGLLG 372
P+ DV + + + + S C + ++C+FEV+G+Y G+ GLLG
Sbjct: 3880 PILPLKLGDVNIHRDLDV-LSITSDTEFSLHCNVQFDLCWFEVSGWYFGRTAGLLG 3934
>EU000366-1|ABS19623.1| 562|Drosophila melanogaster truncated
crossveinless 2 protein.
Length = 562
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 22 GKHLTFPGQCRYVLIHDYVDRNFTVLL 102
GK +F G C+Y+L D + + F + L
Sbjct: 396 GKFFSFQGSCKYLLASDCMGKTFHIRL 422
>AF288223-1|AAG01337.2| 751|Drosophila melanogaster Crossveinless 2
protein.
Length = 751
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 22 GKHLTFPGQCRYVLIHDYVDRNFTVLL 102
GK +F G C+Y+L D + + F + L
Sbjct: 396 GKFFSFQGSCKYLLASDCMGKTFHIRL 422
>AE013599-3194|AAF46719.2| 751|Drosophila melanogaster CG15671-PA
protein.
Length = 751
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 22 GKHLTFPGQCRYVLIHDYVDRNFTVLL 102
GK +F G C+Y+L D + + F + L
Sbjct: 396 GKFFSFQGSCKYLLASDCMGKTFHIRL 422
>BT011200-1|AAR88564.1| 337|Drosophila melanogaster AT31252p
protein.
Length = 337
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Frame = +1
Query: 37 FPGQCRYVLIHDYVDR------NFTVLLQLQNGQPKALVL 138
+P Q RY+ + DYVDR T+LL L+ PK + L
Sbjct: 104 YPPQTRYLFLGDYVDRGKNSVETITLLLALRVKFPKHIYL 143
>AE014134-558|AAF51146.1| 336|Drosophila melanogaster CG8822-PA
protein.
Length = 336
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Frame = +1
Query: 37 FPGQCRYVLIHDYVDR------NFTVLLQLQNGQPKALVL 138
+P Q RY+ + DYVDR T+LL L+ PK + L
Sbjct: 103 YPPQTRYLFLGDYVDRGKNSVETITLLLALRVKFPKHIYL 142
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,612,884
Number of Sequences: 53049
Number of extensions: 326671
Number of successful extensions: 838
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -