Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_M12
(426 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 227 5e-62
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 227 5e-62
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 108 2e-26
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 76 2e-16
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.47
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.62
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 5.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 5.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 5.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 5.8
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 5.8
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 5.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.6
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 227 bits (554), Expect = 5e-62
Identities = 104/107 (97%), Positives = 106/107 (99%)
Frame = +2
Query: 104 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 283
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 284 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 424
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTS
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTS 107
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 227 bits (554), Expect = 5e-62
Identities = 104/107 (97%), Positives = 106/107 (99%)
Frame = +2
Query: 104 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 283
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 284 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 424
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTS
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 107
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 108 bits (260), Expect = 2e-26
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 275 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 424
WVLDKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTS
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 50
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 75.8 bits (178), Expect = 2e-16
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 323 DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 424
DIALWKFET KYYVTIIDAPGHRDFIKNMITGTS
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 34
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 0.47
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 116 KVHINIVVIGHVDSGKST 169
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.2 bits (45), Expect = 2.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 362 VTIIDAPGHRDFI 400
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.62
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 125 INIVVIGHVDSGKST 169
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 5.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 233 SRTFRWYVRRYHRICRSSDQLL 168
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 5.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 233 SRTFRWYVRRYHRICRSSDQLL 168
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 5.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 233 SRTFRWYVRRYHRICRSSDQLL 168
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 5.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 233 SRTFRWYVRRYHRICRSSDQLL 168
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 5.8
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -2
Query: 221 RWYVRRYHRIC 189
RW + ++HR+C
Sbjct: 186 RWDLGKFHRVC 196
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 5.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 280 YPSVLEGTLTHFLG 239
YPS+ +GT ++ LG
Sbjct: 25 YPSIRQGTTSYCLG 38
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 189 TNAVVSTNVPSKSSRRKPRKWVRVPSSTLGYWTN 290
TNA + S+S R+ ++ RVPS G T+
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTH 1800
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,185
Number of Sequences: 438
Number of extensions: 2492
Number of successful extensions: 34
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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