Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M09
         (180 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           19   3.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    19   6.1  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 5   GTRMNSFKYYFDL 43
           GT ++ F YY D+
Sbjct: 240 GTMLSHFAYYVDM 252


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
          peptide receptor 2 protein.
          Length = 354

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +3

Query: 48 RNYLKSHTMILFFKINS 98
          +++LKS++ +  F++NS
Sbjct: 11 QSWLKSNSSLAGFEVNS 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,387
Number of Sequences: 336
Number of extensions: 519
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 39
effective length of database: 109,481
effective search space used:  2189620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)