Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M08
         (280 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...    80   1e-15
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...    80   1e-15
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...    80   1e-15
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...    80   1e-15
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...    75   5e-14
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...    33   0.16 
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    33   0.16 

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 39/70 (55%), Positives = 48/70 (68%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           WTLVSEQ R+  A    G  P+I++V++          LPKQPVIVKAKFFS+ AE+KIK
Sbjct: 79  WTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138

Query: 100 AVGGVCVLSA 71
           +VGG CVL A
Sbjct: 139 SVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 39/70 (55%), Positives = 48/70 (68%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           WTLVSEQ R+  A    G  P+I++V++          LPKQPVIVKAKFFS+ AE+KIK
Sbjct: 78  WTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 137

Query: 100 AVGGVCVLSA 71
           +VGG CVL A
Sbjct: 138 SVGGACVLVA 147


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 39/70 (55%), Positives = 48/70 (68%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           WTLVSEQ R+  A    G  P+I++V++          LPKQPVIVKAKFFS+ AE+KIK
Sbjct: 79  WTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138

Query: 100 AVGGVCVLSA 71
           +VGG CVL A
Sbjct: 139 SVGGACVLVA 148


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 39/70 (55%), Positives = 48/70 (68%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           WTLVSEQ R+  A    G  P+I++V++          LPKQPVIVKAKFFS+ AE+KIK
Sbjct: 79  WTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138

Query: 100 AVGGVCVLSA 71
           +VGG CVL A
Sbjct: 139 SVGGACVLVA 148


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 74.5 bits (175), Expect = 5e-14
 Identities = 37/70 (52%), Positives = 46/70 (65%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           WTLVSEQ R+  A    G  P+I++V++          L KQPVIVKAK FS+ AE+KIK
Sbjct: 79  WTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQPVIVKAKLFSRRAEEKIK 138

Query: 100 AVGGVCVLSA 71
           +VGG CVL A
Sbjct: 139 SVGGACVLVA 148


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKA 197
           WTLVSEQ R+  A    G  P+I++V++
Sbjct: 79  WTLVSEQTRVNAAKNKTGAAPIIDVVRS 106


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKA 197
           WTLVSEQ R+  A    G  P+I++V++
Sbjct: 7   WTLVSEQTRVNAAKNKTGAAPIIDVVRS 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,327,215
Number of Sequences: 237096
Number of extensions: 336659
Number of successful extensions: 515
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1325771524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)