Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M08
         (280 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal prot...    63   4e-11
U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.      63   4e-11
U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal prot...    63   4e-11
AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p pro...    63   4e-11
AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA...    63   4e-11

>X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal protein
           L27a protein.
          Length = 149

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 33/70 (47%), Positives = 41/70 (58%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           W+LV  +   +       K PVI++VK           LP +PVIVKAK+FSK AE KIK
Sbjct: 80  WSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIK 139

Query: 100 AVGGVCVLSA 71
             GGVC+LSA
Sbjct: 140 EAGGVCLLSA 149


>U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.
          Length = 149

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 33/70 (47%), Positives = 41/70 (58%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           W+LV  +   +       K PVI++VK           LP +PVIVKAK+FSK AE KIK
Sbjct: 80  WSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIK 139

Query: 100 AVGGVCVLSA 71
             GGVC+LSA
Sbjct: 140 KAGGVCLLSA 149


>U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal protein
           RpL27a protein.
          Length = 149

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 33/70 (47%), Positives = 41/70 (58%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           W+LV  +   +       K PVI++VK           LP +PVIVKAK+FSK AE KIK
Sbjct: 80  WSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIK 139

Query: 100 AVGGVCVLSA 71
             GGVC+LSA
Sbjct: 140 KAGGVCLLSA 149


>AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p
           protein.
          Length = 149

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 33/70 (47%), Positives = 41/70 (58%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           W+LV  +   +       K PVI++VK           LP +PVIVKAK+FSK AE KIK
Sbjct: 80  WSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIK 139

Query: 100 AVGGVCVLSA 71
             GGVC+LSA
Sbjct: 140 KAGGVCLLSA 149


>AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA
           protein.
          Length = 149

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 33/70 (47%), Positives = 41/70 (58%)
 Frame = -1

Query: 280 WTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXLPKQPVIVKAKFFSKTAEQKIK 101
           W+LV  +   +       K PVI++VK           LP +PVIVKAK+FSK AE KIK
Sbjct: 80  WSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIK 139

Query: 100 AVGGVCVLSA 71
             GGVC+LSA
Sbjct: 140 KAGGVCLLSA 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,662,985
Number of Sequences: 53049
Number of extensions: 100881
Number of successful extensions: 155
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 24,988,368
effective HSP length: 71
effective length of database: 21,221,889
effective search space used: 445659669
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)