Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M07
         (341 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   4.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   8.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   8.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    20   8.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    20   8.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    20   8.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    20   8.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   8.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    20   8.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           20   8.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    20   8.1  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 173 VQRGLVGTIIERFEKKGFKLVGLKFVWP 256
           ++  L+ +  E FEK GF  + + + +P
Sbjct: 121 LRANLIASSFEYFEKYGFNGLDIDWEYP 148


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 318 RPGKNGRDAKSL*CCCSNSS 259
           RP   G  A+ + C C+ S+
Sbjct: 907 RPASGGTTARVVRCVCAGST 926


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 194 TIIERFEKKGFKLV 235
           + +ER +K+GF++V
Sbjct: 495 SFVERVKKRGFEVV 508


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 267 NSSEGQTNFNPTNLKPFF 214
           NSSE  T   PT++  F+
Sbjct: 26  NSSEQLTTPTPTDINSFY 43


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 4/11 (36%), Positives = 8/11 (72%)
 Frame = +1

Query: 298 PAVFPWSCKIH 330
           P ++PW  ++H
Sbjct: 198 PQIYPWMKRVH 208


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 4/11 (36%), Positives = 8/11 (72%)
 Frame = +1

Query: 298 PAVFPWSCKIH 330
           P ++PW  ++H
Sbjct: 198 PQIYPWMKRVH 208


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 4/11 (36%), Positives = 8/11 (72%)
 Frame = +1

Query: 298 PAVFPWSCKIH 330
           P ++PW  ++H
Sbjct: 198 PQIYPWMKRVH 208


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 4/11 (36%), Positives = 8/11 (72%)
 Frame = +1

Query: 298 PAVFPWSCKIH 330
           P ++PW  ++H
Sbjct: 198 PQIYPWMKRVH 208


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 4/11 (36%), Positives = 8/11 (72%)
 Frame = +1

Query: 298 PAVFPWSCKIH 330
           P ++PW  ++H
Sbjct: 198 PQIYPWMKRVH 208


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 4/11 (36%), Positives = 8/11 (72%)
 Frame = +1

Query: 298 PAVFPWSCKIH 330
           P ++PW  ++H
Sbjct: 154 PQIYPWMKRVH 164


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 4/11 (36%), Positives = 8/11 (72%)
 Frame = +1

Query: 298 PAVFPWSCKIH 330
           P ++PW  ++H
Sbjct: 198 PQIYPWMKRVH 208


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 4/11 (36%), Positives = 8/11 (72%)
 Frame = +1

Query: 298 PAVFPWSCKIH 330
           P ++PW  ++H
Sbjct: 198 PQIYPWMKRVH 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,458
Number of Sequences: 336
Number of extensions: 1270
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)