Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M05
         (194 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu...    40   0.008
UniRef50_A6LIR3 Cluster: Putative uncharacterized protein; n=1; ...    35   0.30 
UniRef50_Q9EV74 Cluster: BphS protein; n=3; Proteobacteria|Rep: ...    34   0.53 
UniRef50_UPI0000F2BB05 Cluster: PREDICTED: hypothetical protein;...    31   6.5  
UniRef50_Q3W3J7 Cluster: Putative uncharacterized protein; n=2; ...    30   8.6  
UniRef50_A6GRR0 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  
UniRef50_Q4D806 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  

>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
           nubilalis|Rep: Reverse transcriptase - Ostrinia
           nubilalis (European corn borer)
          Length = 497

 Score = 40.3 bits (90), Expect = 0.008
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = -2

Query: 175 VAGTRWMRVA*NRSS*RSLRETYIQQWTSF 86
           VAG+ WM+ A +RS  +SL E ++QQWTSF
Sbjct: 467 VAGSTWMQAAQDRSLWKSLGEAFVQQWTSF 496


>UniRef50_A6LIR3 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           uncharacterized protein - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 290

 Score = 35.1 bits (77), Expect = 0.30
 Identities = 17/54 (31%), Positives = 33/54 (61%)
 Frame = +3

Query: 27  KELSCVIILSLSCFHPSIQSKDVHCWI*VSRKDLYDDRFYATRIQRVPATCLTH 188
           K+++ ++ + L C  P +Q++D+   + +S  + Y+ R    RIQR+PA  +TH
Sbjct: 2   KKIAYLLSVYLFCLLPKLQAQDIDFPLSLSEIEKYESRI---RIQRLPAVTITH 52


>UniRef50_Q9EV74 Cluster: BphS protein; n=3; Proteobacteria|Rep:
           BphS protein - Ralstonia eutropha (Alcaligenes
           eutrophus)
          Length = 243

 Score = 34.3 bits (75), Expect = 0.53
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = +2

Query: 89  RRPLLDIGLPQRSLRRPVLRHPHPAGSRDMLDTLK 193
           RRP L    P  +LR  +LR  HP GSR  L+TLK
Sbjct: 33  RRPQLPSSPPYATLRDCILRGSHPQGSRLHLETLK 67


>UniRef50_UPI0000F2BB05 Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 386

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 8   TRALNTEGTQLCNNSLTFLFPSIHSIERRPLLDIGLPQRSLRR 136
           T A   +GT+   NS+T +   IH  E+RPL  +G     LRR
Sbjct: 73  TEAKVPQGTKQQGNSITIVILLIHFAEKRPLGQLGGSGPELRR 115


>UniRef50_Q3W3J7 Cluster: Putative uncharacterized protein; n=2;
           Frankia|Rep: Putative uncharacterized protein - Frankia
           sp. EAN1pec
          Length = 269

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 76  PFNRKTSTAGYRSPAKISTTTGFTPPASSGFPRHA*H 186
           P    T  AG R PA  S   G   PAS+G  RH+ H
Sbjct: 226 PRRADTPPAGTREPAGTSEPAGTREPASAGGGRHSRH 262


>UniRef50_A6GRR0 Cluster: Putative uncharacterized protein; n=1;
           Limnobacter sp. MED105|Rep: Putative uncharacterized
           protein - Limnobacter sp. MED105
          Length = 557

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +3

Query: 24  QKELSCVIILSLSCFHPSIQSKDVHCWI*VSRKDLYDDRFYATRIQRVPATC 179
           +K+++CV++  L   HP+  +      I   RK  YD   Y   ++++   C
Sbjct: 276 RKDIACVLVNPLQALHPNTNAPGDSALISSGRKASYDKEAYTQWLKQLRQVC 327


>UniRef50_Q4D806 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 305

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -3

Query: 168 EPAGCGWRKTGRRRDLCGRPISSS 97
           E  GCG  K G  RD+CG+P+SS+
Sbjct: 40  ERGGCGG-KEGAFRDICGKPLSSA 62


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,410,525
Number of Sequences: 1657284
Number of extensions: 3645161
Number of successful extensions: 12501
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12500
length of database: 575,637,011
effective HSP length: 44
effective length of database: 502,716,515
effective search space used: 10054330300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)