Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M05
         (194 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL354890-2|CAI21914.1|  810|Homo sapiens ecotropic viral integra...    29   2.6  
AL133332-1|CAC19437.2|  810|Homo sapiens ecotropic viral integra...    29   2.6  
AF042345-1|AAC16041.1|  607|Homo sapiens truncated EVI5 protein.       29   2.6  
AF008915-1|AAC16031.1|  810|Homo sapiens EVI-5 homolog protein.        29   2.6  
Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein.          28   6.1  
BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subuni...    28   6.1  
BC051698-1|AAH51698.1|  408|Homo sapiens INTU protein protein.         28   6.1  
AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D receptor-inte...    28   6.1  
AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone recepto...    28   6.1  

>AL354890-2|CAI21914.1|  810|Homo sapiens ecotropic viral
           integration site 5 protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
 Frame = -3

Query: 96  GRLSIEWMDGNKK----VRELLHN*VPSVFKALV 7
           GR+  EW D  KK    V+EL+H  +P  F+A+V
Sbjct: 139 GRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIV 172


>AL133332-1|CAC19437.2|  810|Homo sapiens ecotropic viral
           integration site 5 protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
 Frame = -3

Query: 96  GRLSIEWMDGNKK----VRELLHN*VPSVFKALV 7
           GR+  EW D  KK    V+EL+H  +P  F+A+V
Sbjct: 139 GRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIV 172


>AF042345-1|AAC16041.1|  607|Homo sapiens truncated EVI5 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
 Frame = -3

Query: 96  GRLSIEWMDGNKK----VRELLHN*VPSVFKALV 7
           GR+  EW D  KK    V+EL+H  +P  F+A+V
Sbjct: 139 GRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIV 172


>AF008915-1|AAC16031.1|  810|Homo sapiens EVI-5 homolog protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
 Frame = -3

Query: 96  GRLSIEWMDGNKK----VRELLHN*VPSVFKALV 7
           GR+  EW D  KK    V+EL+H  +P  F+A+V
Sbjct: 139 GRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIV 172


>Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein.
          Length = 1566

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 76   PFNRKTSTAGYRSPAKISTTTGFTPPASSG 165
            P  +K  T G +SP+  S+   FTPP S+G
Sbjct: 995  PKRKKADTEG-KSPSHSSSNRPFTPPTSTG 1023


>BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subunit 1
            protein.
          Length = 1581

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 76   PFNRKTSTAGYRSPAKISTTTGFTPPASSG 165
            P  +K  T G +SP+  S+   FTPP S+G
Sbjct: 1010 PKRKKADTEG-KSPSHSSSNRPFTPPTSTG 1038


>BC051698-1|AAH51698.1|  408|Homo sapiens INTU protein protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +2

Query: 20  NTEGTQLCNNSLTFLFPSIHSI---ERRPLLDIGLPQRSLRRPVLRHPH 157
           N  GTQ+ ++SL      IH     E   LL IGLP   +  P   H H
Sbjct: 356 NVTGTQVTSSSLLLNGKQIHVAYWKESDKLLLIGLPAEEIELPSSAHTH 404


>AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D
            receptor-interacting protein complex component DRIP205
            protein.
          Length = 1566

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 76   PFNRKTSTAGYRSPAKISTTTGFTPPASSG 165
            P  +K  T G +SP+  S+   FTPP S+G
Sbjct: 995  PKRKKADTEG-KSPSHSSSNRPFTPPTSTG 1023


>AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone
            receptor-associated protein complex component TRAP220
            protein.
          Length = 1581

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 76   PFNRKTSTAGYRSPAKISTTTGFTPPASSG 165
            P  +K  T G +SP+  S+   FTPP S+G
Sbjct: 1010 PKRKKADTEG-KSPSHSSSNRPFTPPTSTG 1038


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,639,705
Number of Sequences: 237096
Number of extensions: 541991
Number of successful extensions: 1441
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 76,859,062
effective HSP length: 44
effective length of database: 66,426,838
effective search space used: 1328536760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)