Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M03
         (93 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094658-1|AAM11011.1| 1152|Drosophila melanogaster AT22189p pro...    27   4.6  
AE014134-2864|AAF53627.2| 1152|Drosophila melanogaster CG15143-P...    27   4.6  
AF145671-1|AAD38646.1|  800|Drosophila melanogaster BcDNA.GH1197...    26   6.1  
AE014296-3529|AAF51717.1|  800|Drosophila melanogaster CG6014-PA...    26   6.1  

>AY094658-1|AAM11011.1| 1152|Drosophila melanogaster AT22189p
          protein.
          Length = 1152

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 3  RRKKTASAEERRLQSPKKEDCNRRRKKT 86
          R  K    +E RLQSP++++ N +RKK+
Sbjct: 10 RHVKFRILQEDRLQSPRQKEDNIKRKKS 37


>AE014134-2864|AAF53627.2| 1152|Drosophila melanogaster CG15143-PA
          protein.
          Length = 1152

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 3  RRKKTASAEERRLQSPKKEDCNRRRKKT 86
          R  K    +E RLQSP++++ N +RKK+
Sbjct: 10 RHVKFRILQEDRLQSPRQKEDNIKRKKS 37


>AF145671-1|AAD38646.1|  800|Drosophila melanogaster BcDNA.GH11973
           protein.
          Length = 800

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 4   EERRPQAPKKEDCNRRRKKTAIAEERRL 87
           E+RR Q  ++E+ +R+     +AEE+RL
Sbjct: 539 EQRRKQREEQEEQDRQNHAKRLAEEKRL 566


>AE014296-3529|AAF51717.1|  800|Drosophila melanogaster CG6014-PA
           protein.
          Length = 800

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 4   EERRPQAPKKEDCNRRRKKTAIAEERRL 87
           E+RR Q  ++E+ +R+     +AEE+RL
Sbjct: 539 EQRRKQREEQEEQDRQNHAKRLAEEKRL 566


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.310    0.123    0.333 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,374,443
Number of Sequences: 53049
Number of extensions: 27961
Number of successful extensions: 237
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 24,988,368
effective HSP length: 12
effective length of database: 24,351,780
effective search space used: 438332040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)