Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_M02
(424 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 251 4e-66
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 180 1e-44
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 171 5e-42
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 161 7e-39
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 147 9e-35
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 137 1e-31
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 132 4e-30
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 99 4e-20
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 96 2e-19
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 96 3e-19
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 85 7e-16
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 85 7e-16
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 83 2e-15
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 81 7e-15
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 81 9e-15
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 78 6e-14
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 75 5e-13
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 72 4e-12
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 71 1e-11
UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 69 3e-11
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 69 3e-11
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 69 4e-11
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 68 7e-11
UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-10
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 66 3e-10
UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 65 6e-10
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 61 1e-08
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 60 2e-08
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 60 2e-08
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 59 3e-08
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 56 3e-07
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 53 2e-06
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 51 1e-05
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 47 1e-04
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 44 0.001
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 42 0.004
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 41 0.009
UniRef50_O83225 Cluster: 30S ribosomal protein S3; n=1; Treponem... 40 0.016
UniRef50_Q12GW5 Cluster: 30S ribosomal protein S3; n=197; Bacter... 40 0.028
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 39 0.037
UniRef50_A1KB21 Cluster: 30S ribosomal protein S3; n=67; cellula... 38 0.064
UniRef50_A0MNG0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.11
UniRef50_A5AUQ8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.26
UniRef50_Q2JFH0 Cluster: 30S ribosomal protein S3; n=94; Bacteri... 36 0.26
UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10; Chlorob... 36 0.26
UniRef50_P46772 Cluster: 30S ribosomal protein S3; n=5; Thermoto... 36 0.34
UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC pre... 36 0.45
UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1; ... 35 0.79
UniRef50_UPI00015BD7E8 Cluster: UPI00015BD7E8 related cluster; n... 34 1.4
UniRef50_Q3ZZL8 Cluster: 30S ribosomal protein S3; n=18; Bacteri... 33 1.8
UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1; ... 33 2.4
UniRef50_P17480 Cluster: Nucleolar transcription factor 1; n=27;... 32 4.2
UniRef50_Q8WTC1 Cluster: 28S ribosomal protein S15, mitochondria... 32 4.2
UniRef50_P0A4C3 Cluster: 30S ribosomal protein S3; n=39; Bacteri... 32 4.2
UniRef50_Q86NU4 Cluster: AT19678p; n=4; Sophophora|Rep: AT19678p... 32 5.6
UniRef50_Q225J0 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
UniRef50_A5KEC2 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
UniRef50_Q648W3 Cluster: Phenylalanyl-tRNA synthetase alpha subu... 31 7.4
UniRef50_A3DM74 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
UniRef50_P46247 Cluster: 30S ribosomal protein S3; n=3; Entomopl... 31 7.4
UniRef50_Q1NX60 Cluster: Putative uncharacterized protein; n=2; ... 31 9.7
UniRef50_A2SCM1 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
UniRef50_A0DEB5 Cluster: Chromosome undetermined scaffold_48, wh... 31 9.7
UniRef50_Q26601 Cluster: Homeobox protein engrailed-like SMOX-2;... 31 9.7
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 251 bits (615), Expect = 4e-66
Identities = 122/136 (89%), Positives = 129/136 (94%)
Frame = +3
Query: 15 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 194
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 195 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 374
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 375 GVLRFIMESGARGCEV 422
GVLRFIMESGA+GCEV
Sbjct: 121 GVLRFIMESGAKGCEV 136
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 180 bits (437), Expect = 1e-44
Identities = 85/132 (64%), Positives = 109/132 (82%)
Frame = +3
Query: 27 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 206
+SKKR V DGVF AEL EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 207 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 386
RIRELT+ +Q+RFN E ++L+AE+V RGL A+AQAESLR+KL+ L VRRA G++R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 387 FIMESGARGCEV 422
++MESGA+GCEV
Sbjct: 176 YVMESGAKGCEV 187
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 171 bits (416), Expect = 5e-42
Identities = 81/132 (61%), Positives = 102/132 (77%)
Frame = +3
Query: 27 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 206
+SKK+K V DGVF AELNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 207 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 386
RI ELTS++ KRF + + + +YAE+V RGL A QAE+L+ KL+ GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 387 FIMESGARGCEV 422
F M +GA+G EV
Sbjct: 126 FAMGAGAKGVEV 137
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 161 bits (390), Expect = 7e-39
Identities = 83/115 (72%), Positives = 94/115 (81%)
Frame = +3
Query: 15 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 194
M T +SKKRKF DGVF A LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLG
Sbjct: 1 MVTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLG 60
Query: 195 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAV 359
EKG++I+ELTSVVQKRF E SVEL AEKV RG AIAQAESLRYKL+GGLA+
Sbjct: 61 EKGKKIKELTSVVQKRFEFLENSVELCAEKVNNRGFYAIAQAESLRYKLLGGLAM 115
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 147 bits (356), Expect = 9e-35
Identities = 66/135 (48%), Positives = 96/135 (71%)
Frame = +3
Query: 18 ATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 197
A +K R+ + G+F AELNE LTREL ++GY G EVR TP R+EIII A T+ +
Sbjct: 3 AQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDN 62
Query: 198 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 377
GRR++E+ ++QKR+ + E S+E++ +++ +GL A+ Q ESLRYKLI + RRA Y
Sbjct: 63 HGRRLQEVRMMIQKRWRLKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYS 122
Query: 378 VLRFIMESGARGCEV 422
++RF+M++GARGCEV
Sbjct: 123 IIRFVMDAGARGCEV 137
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 137 bits (331), Expect = 1e-31
Identities = 59/132 (44%), Positives = 95/132 (71%)
Frame = +3
Query: 27 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 206
I+KK+KFV DGVF AEL+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G+
Sbjct: 18 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 77
Query: 207 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 386
+ +ELT +QKRF + ++++AE + +GLCA AQ E++ YKL+ + VR A +++
Sbjct: 78 KHKELTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIK 137
Query: 387 FIMESGARGCEV 422
+++ GA+GCE+
Sbjct: 138 SVIQDGAKGCEI 149
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 132 bits (318), Expect = 4e-30
Identities = 66/90 (73%), Positives = 75/90 (83%)
Frame = +3
Query: 153 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLR 332
EIII AT+TQ+VLG+KGR+IRELTSVVQKRF E +VELYAEK R AIAQAESLR
Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAESLR 160
Query: 333 YKLIGGLAVRRACYGVLRFIMESGARGCEV 422
+KL+GGL VRRA YGVL F+MESG +GCEV
Sbjct: 161 FKLLGGLVVRRAGYGVLSFVMESGTKGCEV 190
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 98.7 bits (235), Expect = 4e-20
Identities = 44/127 (34%), Positives = 77/127 (60%)
Frame = +3
Query: 42 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 221
+F+ +G+ AEL EF + L +G+S +E+R+ +II+ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 222 TSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 401
+ +R +P++SVE+ EKV +GLCA+ QA +R K++GG+ RRA L+ +
Sbjct: 81 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 140
Query: 402 GARGCEV 422
A+GC++
Sbjct: 141 KAQGCQI 147
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 96.3 bits (229), Expect = 2e-19
Identities = 50/129 (38%), Positives = 78/129 (60%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
+R F+ + V + ++EFL +EL GY G++++ TP+ +++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
ELT +++K+F + +E+ E++ L A QA L L G+ RRA Y LR IM
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIM 121
Query: 396 ESGARGCEV 422
+GARG E+
Sbjct: 122 NNGARGVEI 130
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 95.9 bits (228), Expect = 3e-19
Identities = 46/62 (74%), Positives = 52/62 (83%)
Frame = +3
Query: 15 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 194
M SKKR+FV DG+F+AELNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLG
Sbjct: 1 MVVQTSKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLG 60
Query: 195 EK 200
EK
Sbjct: 61 EK 62
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 84.6 bits (200), Expect = 7e-16
Identities = 41/127 (32%), Positives = 72/127 (56%)
Frame = +3
Query: 42 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 221
K++ D + +AEL+EF +REL + GY+ + T +II + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 222 TSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 401
++ RF ++ ++ +K+ RGL A ++LR KL + +RRA Y ++R M +
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRA 135
Query: 402 GARGCEV 422
GA GCEV
Sbjct: 136 GAAGCEV 142
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 84.6 bits (200), Expect = 7e-16
Identities = 46/129 (35%), Positives = 74/129 (57%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
++KF+ DGV + +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
+LT + ++I VE+ ++V A AE L L G R+A +R IM
Sbjct: 64 QLTQDLATDYDIESPQVEV--QQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIM 121
Query: 396 ESGARGCEV 422
ESGA GCEV
Sbjct: 122 ESGALGCEV 130
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 83.4 bits (197), Expect = 2e-15
Identities = 43/129 (33%), Positives = 75/129 (58%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
++KFV DG KA ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
+LT V ++++ ++ A++V L A A L + G R+A + LR +M
Sbjct: 64 KLTRDVANKYSLENPQID--AQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVM 121
Query: 396 ESGARGCEV 422
+GA GCEV
Sbjct: 122 NAGALGCEV 130
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 81.4 bits (192), Expect = 7e-15
Identities = 42/132 (31%), Positives = 80/132 (60%)
Frame = +3
Query: 27 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 206
++ +++F+ DG+ + +++EF EL GY G++V TP+ ++I++ A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 207 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 386
IR++T+ ++ RFN+ + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 387 FIMESGARGCEV 422
IMESGA G E+
Sbjct: 119 RIMESGALGAEI 130
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 81.0 bits (191), Expect = 9e-15
Identities = 47/138 (34%), Positives = 73/138 (52%)
Frame = +3
Query: 9 VIMATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSV 188
V+ N+ +KFV G+ K EL+E+L EL GY G+ ++ P ++II R
Sbjct: 2 VMYGENVPVHKKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIA 61
Query: 189 LGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRA 368
+G +GR IR + VQ+RF + + V + +++ + L A L L G+ RRA
Sbjct: 62 IGRRGRNIRRVEEEVQERFPLLGR-VSIEVKELPSPELNPRVVARRLASALERGIHFRRA 120
Query: 369 CYGVLRFIMESGARGCEV 422
YG LR IM +GA+G +
Sbjct: 121 AYGALRRIMNAGAKGAMI 138
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 78.2 bits (184), Expect = 6e-14
Identities = 40/129 (31%), Positives = 74/129 (57%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
++ FV +G+ + ++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
+T ++ +F++ VE+ ++V L A + L G+ RR Y +R IM
Sbjct: 63 AITQKLKNKFDLENPQVEV--KEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIM 120
Query: 396 ESGARGCEV 422
+GA+G EV
Sbjct: 121 AAGAQGVEV 129
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 75.4 bits (177), Expect = 5e-13
Identities = 44/129 (34%), Positives = 73/129 (56%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
K+ F+ + + +++E+L + GYS VE++ TP+ + +II A R+ +++G +G+ I+
Sbjct: 9 KKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIK 68
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
++T V+++ F IP V + KV L A A L L G RRA Y LR IM
Sbjct: 69 QITKVLEEWFGIPNPQVTVV--KVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIM 126
Query: 396 ESGARGCEV 422
+GA G +V
Sbjct: 127 GAGAIGAQV 135
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 72.1 bits (169), Expect = 4e-12
Identities = 42/129 (32%), Positives = 68/129 (52%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
KR F+ + K +++E+L ++ Y+GVEV TPI + +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
+L + +K F + ++ ++ V L A A L L G RRA + +R IM
Sbjct: 65 QLAQIFEKVFGL--ENPQITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIM 122
Query: 396 ESGARGCEV 422
+GA G E+
Sbjct: 123 NAGALGAEI 131
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 70.5 bits (165), Expect = 1e-11
Identities = 43/129 (33%), Positives = 67/129 (51%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
KR F+ K ++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
+L V++K F + + + A + L A A L L G RRA + +R IM
Sbjct: 65 QLAQVLEKFFGLENPQITVTAAE--NPELNARVMAFRLAIALEKGYHFRRAAFITIRRIM 122
Query: 396 ESGARGCEV 422
SGA G EV
Sbjct: 123 SSGAVGAEV 131
>UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 149
Score = 69.3 bits (162), Expect = 3e-11
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +3
Query: 96 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 230
+++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK RRIREL V
Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 69.3 bits (162), Expect = 3e-11
Identities = 34/129 (26%), Positives = 67/129 (51%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
+R FVG+ V + ++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
ELT + +++ +E+ ++V L + L G+ R+ + +R +M
Sbjct: 63 ELTETLATEYSVKNPQIEV--KQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 396 ESGARGCEV 422
SGA+G +
Sbjct: 121 GSGAKGVAI 129
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 68.9 bits (161), Expect = 4e-11
Identities = 44/129 (34%), Positives = 69/129 (53%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
+RKFV + + K + E++ E+ G+ GV++ TP+ +++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
LT + K F I V + ++V A A L L G RRA Y L IM
Sbjct: 64 ALTEKL-KDFGIENPQVSV--DEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIM 120
Query: 396 ESGARGCEV 422
E+GA+GCE+
Sbjct: 121 EAGAKGCEI 129
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 68.1 bits (159), Expect = 7e-11
Identities = 40/128 (31%), Positives = 65/128 (50%)
Frame = +3
Query: 39 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 218
RK + G+ LNE+L R+L Y + TPI +++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 219 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 398
+ V+++ F I +++ +V + L A A + L+ G+ RRA L IM
Sbjct: 66 IAEVLEREFGIENPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMA 123
Query: 399 SGARGCEV 422
+GARG E+
Sbjct: 124 AGARGAEI 131
>UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 286
Score = 66.5 bits (155), Expect = 2e-10
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +3
Query: 96 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 233
++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 66.1 bits (154), Expect = 3e-10
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +3
Query: 96 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 230
++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGRRIRELT V
Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +3
Query: 96 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 191
++ EDGYS ++V+VT +R EIII ATRTQ+ L
Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312
>UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 151
Score = 64.9 bits (151), Expect = 6e-10
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +3
Query: 24 NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEII 161
+ISK+RKFV GVF A LN F RELAE+GYSGVEVRVTP ++II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 60.9 bits (141), Expect = 1e-08
Identities = 31/129 (24%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 39 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 218
+K + + K + EFL L++ GY E+ TP+ + I+I A R ++G KG ++E
Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71
Query: 219 LTSVVQKRFNIPEQSVELY-AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
+++++ + + +++ K+ + A + + G+ RR + +R +M
Sbjct: 72 ISNILTTKLGVENPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLM 131
Query: 396 ESGARGCEV 422
E+GA+G E+
Sbjct: 132 EAGAKGFEI 140
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 60.1 bits (139), Expect = 2e-08
Identities = 37/126 (29%), Positives = 62/126 (49%)
Frame = +3
Query: 39 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 218
R F+ V + + E+L RE G+ G+E TP +++ + A + V+G +G+ I E
Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68
Query: 219 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 398
L ++ F + +E+ ++ L A A L L G RRA + + IM+
Sbjct: 69 LQYRLKSDFKLENPRLEV--NEIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMD 126
Query: 399 SGARGC 416
+GARGC
Sbjct: 127 AGARGC 132
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 59.7 bits (138), Expect = 2e-08
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +3
Query: 72 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 251
+L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K F++
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Query: 252 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME-SGARGCEV 422
V++ +++ T L + + G A RRA ++ IME A G ++
Sbjct: 76 KSPQVDV--KEIETPELYPGVMCNRMASHIERGTAFRRATMWTIQQIMEKKDAMGVQI 131
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 59.3 bits (137), Expect = 3e-08
Identities = 38/129 (29%), Positives = 63/129 (48%)
Frame = +3
Query: 36 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 215
K F+ + K L+EFL + GY+G+E+ TP ++I A ++G G IR
Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66
Query: 216 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 395
+L +++Q F + ++V + V L A A + L + RR +LR +M
Sbjct: 67 KLMTIMQTHFGL--ENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVM 124
Query: 396 ESGARGCEV 422
E+GA G E+
Sbjct: 125 EAGAVGAEI 133
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 56.0 bits (129), Expect = 3e-07
Identities = 30/127 (23%), Positives = 66/127 (51%)
Frame = +3
Query: 33 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 212
K+RKF+ + V + + E++ +E G+ + ++ TP + I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 213 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 392
+++T ++K++ I +E+ + V L A+ + L G + R+A L
Sbjct: 62 QQMTDTLEKKYGIETPQIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRT 119
Query: 393 MESGARG 413
+++GA+G
Sbjct: 120 IQAGAKG 126
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 53.2 bits (122), Expect = 2e-06
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +3
Query: 96 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 236
++ EDGYS ++V+VT + EIII AT+TQ+ L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 50.8 bits (116), Expect = 1e-05
Identities = 28/128 (21%), Positives = 62/128 (48%)
Frame = +3
Query: 39 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 218
++ + D K + E+L L + Y ++ T + + I+I+A + ++G KG++++
Sbjct: 3 KRIIDDNKKKWMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKA 62
Query: 219 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 398
L +++ +FN+ +++ E +A + + G+ RRA LR + E
Sbjct: 63 LADILKSKFNLDNVVIDVIQEPHPEYNARLVAL--RIADAMAKGIRFRRAAIIALRQLQE 120
Query: 399 SGARGCEV 422
+ +G EV
Sbjct: 121 ANVQGAEV 128
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 47.2 bits (107), Expect = 1e-04
Identities = 32/128 (25%), Positives = 62/128 (48%)
Frame = -3
Query: 413 TASTRFHDETKDTITRTTDCKTSNQFISERFSLSDSAEPAGCYXXXXXXXXXLRDIKSLL 234
T ST H +++ T+ ++ +T Q + F L S + + R ++SL
Sbjct: 138 TLSTSSHGKSQHTVGGSSHWQTVQQLGFQGFGLDSSGQTSLLDSLGVDDNSFRRQLESLD 197
Query: 233 HNRCQLTNSTTFLSKHALRPCGHNNDF*TYGCDTHLHTGVAILGQLPREELIELRLKNSI 54
+ QL +ST+ S++ L +N+ + L+TGV + Q EE ++L ++++I
Sbjct: 198 NQGGQLVDSTSLFSQNTLGVGSLDNNLQLGWGLSDLNTGVTLFSQFSGEEFVQLGVEDTI 257
Query: 53 TDEFSFFG 30
+ + SF G
Sbjct: 258 SYQLSFLG 265
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 44.0 bits (99), Expect = 0.001
Identities = 28/117 (23%), Positives = 58/117 (49%)
Frame = +3
Query: 72 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 251
++ + + ++LA G + +E+ + +II A + V+G+ G I+EL +++ +
Sbjct: 38 QIRQLINKKLAAAGIARIEIERAGQQVNVIISAAKPGVVIGKGGESIKELRGDIERL--V 95
Query: 252 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEV 422
+V + ++ + A A + ++ A RRA + +MESGARG +V
Sbjct: 96 SAGTVAVNVAEIPNPNISAPLVALRIAEQIERRFAFRRAMKQAAQRVMESGARGVKV 152
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 42.3 bits (95), Expect = 0.004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3
Query: 357 VRRACYGVLRFIMESGARGCEV 422
VR ACYGVLR+IMESGA+G EV
Sbjct: 30 VRSACYGVLRYIMESGAKGAEV 51
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 41.1 bits (92), Expect = 0.009
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +3
Query: 156 IIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 335
+++ + + ++LG+ G I +LT +QK E + + + L AI AE +
Sbjct: 67 VLVHSAKPGAILGQNGENINKLTQDIQKLLRNKELKLNIEVVNIKNPDLNAIILAEQIAI 126
Query: 336 KLIGGLAVRRACYGVLRFIMESGARG 413
KL R A +R M+SGA+G
Sbjct: 127 KLENRAPFRVAQKFAIRNAMKSGAKG 152
>UniRef50_O83225 Cluster: 30S ribosomal protein S3; n=1; Treponema
pallidum|Rep: 30S ribosomal protein S3 - Treponema
pallidum
Length = 247
Score = 40.3 bits (90), Expect = 0.016
Identities = 26/100 (26%), Positives = 51/100 (51%)
Frame = +3
Query: 123 VEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGL 302
VE+ P R +++ R V+G KG I ++ + VQKR N + V++ +++ L
Sbjct: 57 VEIVRHPQRVTVVMHTARPGVVIGAKGVNIEKIGAEVQKRLN---KKVQIKVKEIKRMEL 113
Query: 303 CAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEV 422
A A+++ +L ++ R+ M+SGA+G ++
Sbjct: 114 NAYLVAQNVARQLTARVSFRKCLRQACAGTMKSGAQGVKI 153
>UniRef50_Q12GW5 Cluster: 30S ribosomal protein S3; n=197;
Bacteria|Rep: 30S ribosomal protein S3 - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 301
Score = 39.5 bits (88), Expect = 0.028
Identities = 32/131 (24%), Positives = 57/131 (43%)
Frame = +3
Query: 30 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 209
+ R F G ++ E+L +L S V + + I I + R V+G+KG
Sbjct: 24 ASNRDFAGMLAEDIKVREYLKAKLKNAAVSRVLIERPAKNARITIFSARPGVVIGKKGED 83
Query: 210 IRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRF 389
I L + ++ +P V + E+V + A A+S+ +L + RRA ++
Sbjct: 84 IENLKKELSRQLGVP---VAVNIEEVRKPEIDAKLIADSITQQLEKRIMFRRAMKRAMQN 140
Query: 390 IMESGARGCEV 422
M GA G ++
Sbjct: 141 AMRLGALGIKI 151
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 39.1 bits (87), Expect = 0.037
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Frame = +3
Query: 39 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 218
RKF+ + EF+ L S V +R TPI + +II + R + + E R
Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEE---RKAH 63
Query: 219 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGL-AVRRACYGVLRFIM 395
L +++ +F + + +E+ + L A AE L + + A RR L IM
Sbjct: 64 LAKLLELKFGLEKPVIEVL--PIENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIM 121
Query: 396 ESGARGCEV 422
+GA G E+
Sbjct: 122 NAGAIGAEI 130
>UniRef50_A1KB21 Cluster: 30S ribosomal protein S3; n=67; cellular
organisms|Rep: 30S ribosomal protein S3 - Azoarcus sp.
(strain BH72)
Length = 260
Score = 38.3 bits (85), Expect = 0.064
Identities = 28/117 (23%), Positives = 54/117 (46%)
Frame = +3
Query: 72 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 251
++ ++L + LA V + + + + + R V+G+KG I L +QK +
Sbjct: 38 KVRDYLKKRLAHASVGRVVIERPAKNARVTLFSARPGVVIGKKGEDIEALKRDLQKIVGV 97
Query: 252 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEV 422
P V + E+V + A A+S+ +L + RRA ++ M GA+G ++
Sbjct: 98 P---VHVNIEEVRKPEIDAKLIADSIAQQLEKRIMFRRAMKRAMQNAMRLGAQGIKI 151
>UniRef50_A0MNG0 Cluster: Putative uncharacterized protein; n=1;
Thermus phage phiYS40|Rep: Putative uncharacterized
protein - Thermus phage phiYS40
Length = 1014
Score = 37.5 bits (83), Expect = 0.11
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +3
Query: 48 VGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTS 227
+ + +FK+E FL+R L+E Y+ ++ RS I R L +K + E+
Sbjct: 224 ISERIFKSEREIFLSRTLSEF-YNESLNAISIARSNFIAQLNRVNESL-QKAQSPEEVAR 281
Query: 228 VVQKRFNIPEQSVELYAEKVATR 296
+ ++RFN + +LYAE++ R
Sbjct: 282 LQEERFNYLKSLTQLYAEELKIR 304
>UniRef50_A5AUQ8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 617
Score = 36.3 bits (80), Expect = 0.26
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 159 IIMATRTQSVLGEK-GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 335
+I TRT S+ + ++IREL SV Q +I + + A A RGL A+ ES+R
Sbjct: 101 VIRQTRTLSMTSAQFPKKIRELQSVTQSYVSIDATTKDKAAALAAARGLGRNAKIESVRL 160
Query: 336 KLIGGLAVRRACYGVLRFIMESGARG 413
++ L + +C G+ M + + G
Sbjct: 161 PMLTVLKL-HSCEGITSASMAAISHG 185
>UniRef50_Q2JFH0 Cluster: 30S ribosomal protein S3; n=94;
Bacteria|Rep: 30S ribosomal protein S3 - Frankia sp.
(strain CcI3)
Length = 315
Score = 36.3 bits (80), Expect = 0.26
Identities = 29/128 (22%), Positives = 60/128 (46%)
Frame = +3
Query: 39 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 218
+ +VG+ V ++ + ++R + G S V++ T R + I R V+G +G
Sbjct: 29 KAYVGEDV---KIRKMMSRGMERAGISRVDIERTQGRLRVDIHTARPGIVIGRRGAEADR 85
Query: 219 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 398
+ ++K + + V+L +V + A A+ + +L ++ RRA ++ M+
Sbjct: 86 IRGDLEK---LTGKQVQLNILEVKNPEVDAQLVAQGVAEQLSSRVSFRRAMRKAMQTAMK 142
Query: 399 SGARGCEV 422
GA+G V
Sbjct: 143 GGAKGIRV 150
>UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10;
Chlorobiaceae|Rep: 30S ribosomal protein S3 - Chlorobium
tepidum
Length = 253
Score = 36.3 bits (80), Expect = 0.26
Identities = 32/127 (25%), Positives = 59/127 (46%)
Frame = +3
Query: 42 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 221
K D V + ++ L +E A G + + + T +I I A R +++G KG I L
Sbjct: 32 KIKQDQVIRNYVHARLKKEKA--GIAKIVIERTTKHIKINIYAARPGAIVGHKGEEINNL 89
Query: 222 TSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 401
+ Q+ I + V++ +V + A E++ Y+L ++ RRA ++ M +
Sbjct: 90 S---QELTRITGKEVKIDVIEVIKPEIEAQLIGENIAYQLENRVSFRRAMKMAIQQAMRA 146
Query: 402 GARGCEV 422
GA G +
Sbjct: 147 GAEGVRI 153
>UniRef50_P46772 Cluster: 30S ribosomal protein S3; n=5;
Thermotogaceae|Rep: 30S ribosomal protein S3 -
Thermotoga maritima
Length = 209
Score = 35.9 bits (79), Expect = 0.34
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Frame = +3
Query: 72 ELNEFLTRELAEDGYSGVEV-RVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFN 248
E+ + + + G S + V R R I + R ++G KG I L ++++FN
Sbjct: 37 EIRKIIKNKYYHAGISEIYVERPDAERINITVKTARPGIIIGRKGSEITSLREELERKFN 96
Query: 249 IPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEV 422
+ V + E++ T L A AES+ ++ + + A + M GA+G +V
Sbjct: 97 ---RRVVINIEEIKTPELDAQLVAESIASRIEKRASYKVAMKRAIMNAMRKGAQGIKV 151
>UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC
precursor - Enterococcus faecalis (Streptococcus
faecalis)
Length = 545
Score = 35.5 bits (78), Expect = 0.45
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 45 FVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIII 164
FVGDG F+ + EFL +L E+ G++V +TP+ + + +
Sbjct: 397 FVGDGEFEKKAGEFLQGQL-EENLEGLKVNITPVPANVFM 435
>UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1;
n=9; Endopterygota|Rep: Drosophila dodeca-satellite
protein 1 - Drosophila melanogaster (Fruit fly)
Length = 1301
Score = 34.7 bits (76), Expect = 0.79
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 138 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIA 314
T ++ + + +LG+ G+R+RE+ V R NIP QS E +E + G IA
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIA 224
Query: 315 QAE 323
QAE
Sbjct: 225 QAE 227
>UniRef50_UPI00015BD7E8 Cluster: UPI00015BD7E8 related cluster; n=1;
unknown|Rep: UPI00015BD7E8 UniRef100 entry - unknown
Length = 231
Score = 33.9 bits (74), Expect = 1.4
Identities = 22/116 (18%), Positives = 57/116 (49%)
Frame = +3
Query: 75 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIP 254
+ +++ G S V + + + + I++++ ++G KG + +L + +++ +
Sbjct: 39 IRKYIKERYKSAGISKVTIERSGEKIRVRILSSKPGIIIGRKGAEVDQLKNDLERI--VK 96
Query: 255 EQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEV 422
+ + L ++V L A AE + ++ ++ RRA + ++SGA+G +V
Sbjct: 97 NKDISLSVDEVRVPQLDAQLVAEDIALQIERRVSHRRAMKRAIDNAIKSGAKGIKV 152
>UniRef50_Q3ZZL8 Cluster: 30S ribosomal protein S3; n=18;
Bacteria|Rep: 30S ribosomal protein S3 - Dehalococcoides
sp. (strain CBDB1)
Length = 278
Score = 33.5 bits (73), Expect = 1.8
Identities = 23/117 (19%), Positives = 58/117 (49%)
Frame = +3
Query: 72 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 251
+L + ++++ + S V++ + + + R V+G G+R+ E+ ++ ++
Sbjct: 38 KLRKAISKKYVDAAISQVDIERQSNKVTVSVRTARPGIVIGRGGQRVDEMRHFLE---DL 94
Query: 252 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEV 422
+ V+L +++ L A A S+ ++ +A RRA + M++GA+G ++
Sbjct: 95 IGKKVQLNIVEISQAELDAFLVARSVAEQIERRVAYRRAMKQAIFRSMQAGAKGIKI 151
>UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 283
Score = 33.1 bits (72), Expect = 2.4
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 48 VGDGVFK-AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELT 224
VGD + + ++ +FL + G +E+ + I + R V+G+ G I L
Sbjct: 29 VGDLLVEDKKIRDFLKKTQYGAGIPKIEIERDNAKVRIYLHCARPGVVIGKGGEAIEALR 88
Query: 225 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 404
++K +SV L +V + A AE++ +L + RRA + M G
Sbjct: 89 LQLEKMLG---KSVALNIVEVKNPDMDAQLIAENIAQQLEKRIGFRRAMKNAMGRAMRMG 145
Query: 405 ARG 413
ARG
Sbjct: 146 ARG 148
>UniRef50_P17480 Cluster: Nucleolar transcription factor 1; n=27;
Tetrapoda|Rep: Nucleolar transcription factor 1 - Homo
sapiens (Human)
Length = 764
Score = 32.3 bits (70), Expect = 4.2
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +3
Query: 18 ATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 197
ATN SKK KF G+ K +N + ++ +++ S E+ P++ ++ + +R Q +
Sbjct: 554 ATNSSKKMKFQGEPK-KPPMNGY--QKFSQELLSNGELNHLPLKERMVEIGSRWQRISQS 610
Query: 198 KGRRIRELTSVVQKRFNI 251
+ ++L QK++ +
Sbjct: 611 QKEHYKKLAEEQQKQYKV 628
>UniRef50_Q8WTC1 Cluster: 28S ribosomal protein S15, mitochondrial
precursor; n=6; Endopterygota|Rep: 28S ribosomal protein
S15, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 280
Score = 32.3 bits (70), Expect = 4.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 95 PREELIELRLKNSITDEFSFFGNVRRHDYPR 3
PR+++I++RLK I F +RR DYPR
Sbjct: 132 PRDKMIKVRLKELIDKRKKFLKYLRRWDYPR 162
>UniRef50_P0A4C3 Cluster: 30S ribosomal protein S3; n=39;
Bacteria|Rep: 30S ribosomal protein S3 - Streptococcus
pneumoniae
Length = 217
Score = 32.3 bits (70), Expect = 4.2
Identities = 24/113 (21%), Positives = 52/113 (46%)
Frame = +3
Query: 75 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIP 254
+ +F+ +ELA+ S +E+ + + + + V+G+ G + L + + K +
Sbjct: 38 IRKFVQKELADAAVSTIEIERAVNKVNVSLHTAKPGMVIGKGGANVDALRAKLNK---LT 94
Query: 255 EQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 413
+ V + ++ L A E + +L +A RRA ++ M +GA+G
Sbjct: 95 GKQVHINIIEIKQPDLDAHLVGEGIARQLEQRVAFRRAQKQAIQRAMRAGAKG 147
>UniRef50_Q86NU4 Cluster: AT19678p; n=4; Sophophora|Rep: AT19678p -
Drosophila melanogaster (Fruit fly)
Length = 1339
Score = 31.9 bits (69), Expect = 5.6
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Frame = +3
Query: 27 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 206
I K K +G GV EFL E VR+ +E + RT L K
Sbjct: 502 IEKSEKQIGSGVTNQSAGEFLRLEQYNQRLRETVVRLRDTLAEEKQIGQRTHKELETKHS 561
Query: 207 RIRELTSV---VQKRF-NIPEQSVELYAEKVATRGLCA-IAQAESLRYKL 341
I EL S+ + +R N+ Q ++L + A+ G A + Q SL+ +L
Sbjct: 562 EINELKSIKELLSRRVDNMEMQLMDLKEQVDASLGAEAMVTQLASLKLEL 611
>UniRef50_Q225J0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 281
Score = 31.5 bits (68), Expect = 7.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 295 RVATFSAYSSTDCSGILNRFCTTDVSSRILRPFSPSTLCVL 173
R AT Y+++DC + +FC + +S I+ S +C+L
Sbjct: 58 REATTYCYTTSDCIRSIYQFCRSQISRHIINERENSQICLL 98
>UniRef50_A5KEC2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1203
Score = 31.5 bits (68), Expect = 7.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 137 DTHLHTGVAILGQLPREELIELRLKNSITDEFSFFGNVRRHDYP 6
D H A +G + E++IE+ L+ ITDEF F + D P
Sbjct: 812 DEHADPKYAHIGIITLEDVIEILLQEEITDEFDFRSVKKGTDIP 855
>UniRef50_Q648W3 Cluster: Phenylalanyl-tRNA synthetase alpha
subunit; n=4; environmental samples|Rep:
Phenylalanyl-tRNA synthetase alpha subunit - uncultured
archaeon GZfos36D8
Length = 534
Score = 31.5 bits (68), Expect = 7.4
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 150 SEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESL 329
+E+ TR LGE G + T + ++ I E +V A +A RGLC I + +++
Sbjct: 21 TELTATETRVLWALGEGGGEWNQRT--LSEKTGINEDAVMQTAFMLAQRGLCEIKEEKNV 78
Query: 330 RYKL 341
Y+L
Sbjct: 79 YYRL 82
>UniRef50_A3DM74 Cluster: Putative uncharacterized protein; n=1;
Staphylothermus marinus F1|Rep: Putative uncharacterized
protein - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 477
Score = 31.5 bits (68), Expect = 7.4
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 162 IMATRTQSVLGEKGRRIRELTSVVQKRFNIP 254
I AT +L +KG RI + ++++++RFN+P
Sbjct: 10 ITATAVSKILLDKGYRIVQASNIIRERFNLP 40
>UniRef50_P46247 Cluster: 30S ribosomal protein S3; n=3;
Entomoplasmatales|Rep: 30S ribosomal protein S3 -
Mesoplasma florum (Acholeplasma florum)
Length = 241
Score = 31.5 bits (68), Expect = 7.4
Identities = 23/114 (20%), Positives = 49/114 (42%)
Frame = +3
Query: 72 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 251
++ E + + L + S +++ T +II R VLG++G+ + + + VQK
Sbjct: 38 KIREGVLKLLKDAAVSKIKIERTNSNITLIIRTARPAIVLGQEGKNVSNIATAVQKIAKD 97
Query: 252 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 413
VE+ +V A A + ++ + R +R +++G +G
Sbjct: 98 RNLKVEVKVIEVKNPDADATLVARWIGEQITNRASFRTVQKLAIRKALKAGVKG 151
>UniRef50_Q1NX60 Cluster: Putative uncharacterized protein; n=2;
Deltaproteobacteria|Rep: Putative uncharacterized
protein - delta proteobacterium MLMS-1
Length = 1693
Score = 31.1 bits (67), Expect = 9.7
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +3
Query: 51 GDGVFKAELNEFLTRELAEDGYSGVEVRVTPI-----RSEIIIMATRTQSVLGEKGRRIR 215
G V E FL+RE G+ E V I S+I AT Q++LG +GR++
Sbjct: 328 GKSVIGKEAVAFLSREFFAFGFRVEEFAVAHIDETLHNSQIPARATELQAILGAQGRKVL 387
Query: 216 ELTSV 230
+ SV
Sbjct: 388 VIESV 392
>UniRef50_A2SCM1 Cluster: Putative uncharacterized protein; n=1;
Methylibium petroleiphilum PM1|Rep: Putative
uncharacterized protein - Methylibium petroleiphilum
(strain PM1)
Length = 278
Score = 31.1 bits (67), Expect = 9.7
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -1
Query: 283 FSAYSSTDCSGILNRFCTTDVSSRILRPFSPSTLCVLVAIIMISERMG 140
F A T G L+ DV +LR + +++CVL+++I ++ER+G
Sbjct: 89 FGAAMLTTVVGALDHLAPGDVGF-LLRQVATASVCVLLSLIYLAERLG 135
>UniRef50_A0DEB5 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 782
Score = 31.1 bits (67), Expect = 9.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 186 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 287
+L EK +I + S QK ++ +QS+E Y+EK+
Sbjct: 224 MLREKENKINDKKSKFQKNIDLIQQSIEFYSEKI 257
>UniRef50_Q26601 Cluster: Homeobox protein engrailed-like SMOX-2;
n=2; Schistosoma|Rep: Homeobox protein engrailed-like
SMOX-2 - Schistosoma mansoni (Blood fluke)
Length = 524
Score = 31.1 bits (67), Expect = 9.7
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -3
Query: 239 LLHNRCQLTNSTTFLSKHALRPCGHNNDF*TYGCDTHLHTGVAILGQLPREELIELRLKN 60
L +++ +TN F++ H + C HNN +Y D ++ I +L E L L L N
Sbjct: 27 LQYDKEMVTNFLNFINHHYIWNCYHNNSNNSYNNDLDMNN---IQEKLIIEHLDPLMLIN 83
Query: 59 SITD 48
S TD
Sbjct: 84 SYTD 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,776,390
Number of Sequences: 1657284
Number of extensions: 7470031
Number of successful extensions: 20099
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 19694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20081
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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