Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_M01
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   1.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   5.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   9.2  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 10/45 (22%), Positives = 23/45 (51%)
 Frame = +2

Query: 188 SYLLTETLLENQFT*HYLRSRADKSVYKNEGICNFVLFIVIEHKC 322
           ++L+  +  EN++T  Y     DK +  +  + N++  ++ E  C
Sbjct: 11  AFLVAVSAAENKYTNKYDNVDVDKILNNDRVLTNYIKCLMDEGPC 55


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 72  YFLTFIFLLCLLP 34
           YFLT IFL  ++P
Sbjct: 237 YFLTIIFLFFIIP 249


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 207 HYLRISLHDIISEVERTS 260
           H ++   HDII E+E  S
Sbjct: 316 HQIQTEDHDIIDEIEMFS 333


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 135 LIILYSTTRPFHMTYFYL 82
           L+IL S  RP+  +Y Y+
Sbjct: 37  LVILSSIDRPYLKSYTYI 54


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 207 HYLRISLHDIISEVERTS 260
           H ++   HDII E+E  S
Sbjct: 347 HQIQTEDHDIIDEIEMFS 364


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 102 HMTYFYLINFYFLTFIFLLCL 40
           H+ +     F+ +  +FLLCL
Sbjct: 179 HLLFCCAFIFFNMHLLFLLCL 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,032
Number of Sequences: 336
Number of extensions: 1197
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)