Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L24
         (416 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.48 
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   3.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   4.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 0.48
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = +2

Query: 221  PGYNGGSSPAFRNIADISANKHSRWHGVRRGGGCRISRDAAD--PCARRA 364
            PG  GG SPA R    +     +  H    GGG   +   +D  P +R A
Sbjct: 1022 PGGTGGGSPAMRVATPVVVAGGAEAHETTNGGGGSTAAPLSDSRPVSRSA 1071


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 153 FRRA*QSEPHYTDYSRWTPDR 91
           F ++ Q +P Y+DY  W P +
Sbjct: 130 FLKSVQKDPTYSDYYVWHPGK 150


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 227 SRAPDRFQSITRSRRRSVPSCATPCFGERS 138
           S  P+RF S  R +++  PS    C G  S
Sbjct: 703 SPRPNRFPSRPRRQQQHQPSALAGCSGSSS 732


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,660
Number of Sequences: 2352
Number of extensions: 6291
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)